Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0824 ATGGCTTTGATTGTGGGTCAACAATCAAACTTCAAGCACTTTTGTAAAATATGCAAGAAAGGTTTTGGTTGTGGAAGAGCTCTTGGAGGACACATGAGAGCACATGGCATAGGTGATGAAACTGCGCACATGGATGATGATGATGACGACGATGACCCTGAAGCTGATTGGGAAGAGAGGCTTGGTGGTAATGTATCACCAAGCAATAAACGTATGTATGCCCTAAGAACAAACCCTAATAGGTCAAAGAGTTGTAGGGTATGTAAGAATTGTGGTAAAGAGTTTTTGTCATGGAAATCTTTCCTTGAACATGGAAAGTGCACCTCTGAAGACGCTGAATCTCTAGTTTCATCTCCTACTTCTGATGATGGTGGTGACGATGATGATAATGGTGTTGGCCGAAGAGGTTGTGGTTGGTCAAAAAGGAAAAGATCATTTAGAGCCAAAGTTGGTAATTGCCCTTCAAGTGAAGACGAAGATCTAGCTAACTGTTTGATGATGTTGTCGAATGCGATTGTTGATCCTCTTGTTGCTGAGCCTGAAGAGTTTTGTGCCTCAGCAAGTAAAGATGAGGAAAGAAGAAACCATATGAACTTCATTGCACCATTGTCATGTCCTCTTGATAACAAGGCTAAAGGAGTTGCAAATGGCTTGTTTGAATGCAAAGCCTGCAAGAAAGTTTTCAACTCTCATCAAGCATTGGGTGGCCATAGAGCTAGCCATAAAAAAGTTAAGGGTTGTTTTGCTGCAAGACTTGATAACTTTGATGATAGTTTTCCTGAAGATGATGCCATAACACATGAAGATTTTTTCACTACAAAATCAAACTCCACTCTTCAATTTGATCATGGCTCCACATTACCCTCCTCTTCCTCAAAGAGAAAATCCAAAGTCCATGAATGTTCAATTTGTCATAGAAGTTTCTCTTCTGGACAAGCATTGGGGGGACACAAAAGGTGTCATTGGATCACATCATCAAATGGATTAGATACTTCAACATTGGCTAGATTTCAACAATTTCAGGACCATATTGAACAAATACCAAAGTTTGATAGCTCTTCTGAGCCACTTGATCTCAAGCTAGACCTTAACCTTCCAGCTTCTACCAATGAACTTGCAAGAAGGAATAATGTGTCCACAGAAATTCTCATGCAGCAGCCATGGGTTGGAATAAAGGACATAATTAAAGATGATGATAATATTAATAACAGTAGTCATTGTCAGAATCAACACCAACAACCTAACCAAATTGACAATAACAACAATGATGAAGACAAAAGTAATAACATTAGCAATACTATGATGCAAAATGATGTGGATAATGAAGATGATTGTAATGTCAAATTAGCAAAACTTAGTGAGCTAAAGGACATGAACAATGATGGAAGTTCTTCACCATGGTTGCAGGTGGGATTCAGCTCTACAACTAATGTGGGGAGAGAGAAGTCATAA 1452 0.3905 MALIVGQQSNFKHFCKICKKGFGCGRALGGHMRAHGIGDETAHMDDDDDDDDPEADWEERLGGNVSPSNKRMYALRTNPNRSKSCRVCKNCGKEFLSWKSFLEHGKCTSEDAESLVSSPTSDDGGDDDDNGVGRRGCGWSKRKRSFRAKVGNCPSSEDEDLANCLMMLSNAIVDPLVAEPEEFCASASKDEERRNHMNFIAPLSCPLDNKAKGVANGLFECKACKKVFNSHQALGGHRASHKKVKGCFAARLDNFDDSFPEDDAITHEDFFTTKSNSTLQFDHGSTLPSSSSKRKSKVHECSICHRSFSSGQALGGHKRCHWITSSNGLDTSTLARFQQFQDHIEQIPKFDSSSEPLDLKLDLNLPASTNELARRNNVSTEILMQQPWVGIKDIIKDDDNINNSSHCQNQHQQPNQIDNNNNDEDKSNNISNTMMQNDVDNEDDCNVKLAKLSELKDMNNDGSSSPWLQVGFSSTTNVGREKS 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0824 483 SUPERFAMILY beta-beta-alpha zinc fingers 13 105 IPR036236 -
Lal14g0824 483 Gene3D Classic Zinc Finger 11 107 - -
Lal14g0824 483 Gene3D Classic Zinc Finger 217 321 - -
Lal14g0824 483 SMART c2h2final6 299 321 IPR013087 -
Lal14g0824 483 SMART c2h2final6 13 35 IPR013087 -
Lal14g0824 483 SMART c2h2final6 219 241 IPR013087 -
Lal14g0824 483 Pfam C2H2-type zinc finger 13 35 - -
Lal14g0824 483 Pfam C2H2-type zinc finger 219 243 - -
Lal14g0824 483 Pfam C2H2-type zinc finger 298 323 - -
Lal14g0824 483 ProSitePatterns Zinc finger C2H2 type domain signature. 15 35 IPR013087 -
Lal14g0824 483 MobiDBLite consensus disorder prediction 457 483 - -
Lal14g0824 483 MobiDBLite consensus disorder prediction 112 134 - -
Lal14g0824 483 PANTHER OS02G0659100 PROTEIN 1 481 - -
Lal14g0824 483 MobiDBLite consensus disorder prediction 401 440 - -
Lal14g0824 483 PANTHER OS02G0659100 PROTEIN 1 481 - -
Lal14g0824 483 MobiDBLite consensus disorder prediction 43 57 - -
Lal14g0824 483 MobiDBLite consensus disorder prediction 39 71 - -
Lal14g0824 483 ProSitePatterns Zinc finger C2H2 type domain signature. 221 241 IPR013087 -
Lal14g0824 483 ProSiteProfiles Zinc finger C2H2 type domain profile. 219 246 IPR013087 -
Lal14g0824 483 SUPERFAMILY beta-beta-alpha zinc fingers 218 321 IPR036236 -
Lal14g0824 483 ProSiteProfiles Zinc finger C2H2 type domain profile. 299 321 IPR013087 -
Lal14g0824 483 MobiDBLite consensus disorder prediction 400 441 - -
Lal14g0824 483 ProSitePatterns Zinc finger C2H2 type domain signature. 301 321 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0824 Lal-Chr14 10386160 10387611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g0824 125 365 C2H2 Transcription Factor Family AT1G02040 36.992 7.08e-35 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lal14g0824 zf-C2H2_6 1.6e-12 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0824 - - gmx:100793846 686.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g0824 14 10386160 10387611 Lal14g0824 14 10386160 10387611 ECH