Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0820 ATGCACACGCCTTCTCTCTCTTTCTCTCTCCGTCTCCGTTTTCTCTCTCCGGTCACCGTCAATTCAATTCAACCGTTTTCTCTCCGTGAAGTGGAATTGAGGTTGAAAATGGAGTCAAGGAGTTGCATGAACGTGGCGTGTGCCAGCACAACGTCGAATCGGTGGCGCAAAGGTTGGGCCTTGCGATCCGGCGAATTAGCCGATCTATGTGATAAGTGCGGTTCTGCTTATGAACAATCAACATTTTGTGATTTGTTTCACTCAAATGAGGATGGTTGGAGAGAGTGCACTTCATGTGGAAAGCGACTTCATTGTGGATGTGCTGCGTCTTTGTCTCAGCTTGAGTTACTAGATCTGGGTGGTGTGAGCTGTATAAATTGCGTGAAGAATTTCGGACTTCAACCTGTTGCATCTACTGAAAAGGCTAATGGATCTGGGACATCAAAGGTAAAAAATGTCAATGAACAACATTGCATATCTCTGGCTAACCAATTAAATGTGAGGGGTATGCAAATAGGGCATTATGCAGAGAGCGATGGGCTGAGGTGCTGGCTCAAAGCACATAATAATGTTGACACAAGTGGGACTTCTGCAGAAATGAAACTGGAAGAAGTTTCACCTTTGATTGAAGATATTGGGAACACTTTGATATCACAATTCCGTCATGAGTTTAATGGATCATCTAAGGCTGTCAAAGCAGACAACAATAAGTCAGACATGGAAATGCGAGATATATATGAATCATTGGCACAGACAAATTTGAGTATGACCCTTGCTGCTCCATTAGGAAACTCAAATCCCTTTCAGAGAGCTATTGTTGATGAAAGGGAACAAAGTAAAACAGCGCCTCCACTTCTGTCAGGGTCTAGGTCTCGCATTCTATTACCTAAGCCCCCTAGGTCAACTCTCGCTGTGGGCTTAGAAGCAAATACAGGCATGACATCCCAGATTCGTGTAGCAAGGCCTCCTGCTGAAGGACGGGGAAGGAATCAGTTACTTCCGCGTTATTGGCCTAGGATTACAGATCAAGAGTTGCAGCAAATATCTGGAGGTTCAAATTCCACCATCGTGCCACTCTTTGAGAAGATGCTTAGTGCAAGTGATGCTGGTCGAATTGGTCGCTTGGTTTTACCAAAAGCATGTGCTGAAGCCTACTTTCCTCCTATCTCTCAACCGGAGGGCCTTCCTTTGAGAATCCAAGATGTGAAGGGAAAAGAATGGGTGTTCCAGTTTAGATTTTGGCCAAATAATAACAGCAGGATGTATGTTTTAGAAGGTGTAACTCCGTGCATCCAATCTATGCAATTGCAAGCTGGGGATACTGTAACATTCAGCCGTATGGACCCTGAGGGGAAACTTGTAATGGGGTTTAGGAAGGCAATTAATCCTTCAGCAGTAAAGGACGCTCATCCATCTAATGTGCCCAATGGTTCTCATTCAAGTGAAACTTCCTACTCTGGTGTTTATGAGAATTTACCTATATTAAGTGGTTCTGGCCTTCTTCAGTCACAAAAGGGAAGTTCAGAGACCCACCTACATATGCTGTCTAAAGAATGGAATTCAGCTGGTGGTGACATGAACTTGCATAATATTGAGATGCCTGAAAGCAGGAAAAGAGAGGGGATGCTTTTGCCACCTATGATGGTTCCTGAGAAGAAGAGAGCTCGAAATATTGGGTCAAAAAGTAAGAGATTGCTTATTGAAAGCCAGGATGCACTGGAGCTGAAACTTACATGGGAAGAGGTTCAGGATTTGTTACGTCCACCTCCAACAACTAAGCCAAGCATTGTAATGATTGAGGATCATGTATTTGAAGAGTATGAAGAACCTCCTGTCTTTGGTAAGAGGAGTATATGCGTAGCTCACTCAACTGGGATAAATGAGCAGTGGACACAATGTGATAAGTGCTCAAAATGGCGGAAGTTGCCAATTGATGTGCTTGTTCCTCCTAAGTGGACATGCACGGAAAATTTATGGGATCAGAATAGGTCTTCATGTTCTGCTCCCAACGAGTTGAATCCAAGGGAACTGGATAATCTGCTGAGACTGAACAAGGAATTCAAGAAACAAAAAGTGGCAGCAAGCCCCAGACCACTGGAACTTGAATCTTCTGGACTGGATGCTTTGGCTAACGCTGCAATACTGGGAGATGATGCAGGTGACCCTGGAAGCACACCAGTCGCTACCACCACAAAACACCCTCGGCATAGACCTGGGTGCTCCTGCATTGTGTGTATCCAACCACCAAGTGGAAAAGGTAAACACAAACCTACATGCACCTGCAATGTGTGCATGACAGTTAAACGCCGGTTTAAAACCCTGATGATGCGAAAGAAGAAGCGTCAATCTGAACGTGAAGCAGAAATTGCTCAGAGAAATCAGAAATCATTGGGGACCAAGGATGAAGCAGAAGTAGACAGCACCTCTCTTTTAACTCCAGTTGATGGTTTGGAGAATGGAGCAAGGGTGCCAAATGAGTTGGACTCAAGGAGTCAAAACCACATTGCTGAAGCTGCGAAGGGACAATTAGACTTGAATTGCCAACCTGATCGAGAAGACATGCAAGCCGGGCTAAATAATAATGTGAGCATGATGAGCCTTCTTCAAGAAGCAAATCTCCCTCTGGAGACCTATATGAAGAAAAATGGCATTACTAGCTTGACATTGGAGCAGCAAACAAATTCCGCTTCAAATGTGCCGGCACCGACAACCAATGAGAGTGAGGGAAGACATAATGAGGATTGCTTTACTGCTTCTGCTGCTCATGAGCAGGAAAGCAGCCCTGAAGAAAACAGTGAGCAAGATAAAGACCAGAACAATTCACACTCATGA 2832 0.4453 MHTPSLSFSLRLRFLSPVTVNSIQPFSLREVELRLKMESRSCMNVACASTTSNRWRKGWALRSGELADLCDKCGSAYEQSTFCDLFHSNEDGWRECTSCGKRLHCGCAASLSQLELLDLGGVSCINCVKNFGLQPVASTEKANGSGTSKVKNVNEQHCISLANQLNVRGMQIGHYAESDGLRCWLKAHNNVDTSGTSAEMKLEEVSPLIEDIGNTLISQFRHEFNGSSKAVKADNNKSDMEMRDIYESLAQTNLSMTLAAPLGNSNPFQRAIVDEREQSKTAPPLLSGSRSRILLPKPPRSTLAVGLEANTGMTSQIRVARPPAEGRGRNQLLPRYWPRITDQELQQISGGSNSTIVPLFEKMLSASDAGRIGRLVLPKACAEAYFPPISQPEGLPLRIQDVKGKEWVFQFRFWPNNNSRMYVLEGVTPCIQSMQLQAGDTVTFSRMDPEGKLVMGFRKAINPSAVKDAHPSNVPNGSHSSETSYSGVYENLPILSGSGLLQSQKGSSETHLHMLSKEWNSAGGDMNLHNIEMPESRKREGMLLPPMMVPEKKRARNIGSKSKRLLIESQDALELKLTWEEVQDLLRPPPTTKPSIVMIEDHVFEEYEEPPVFGKRSICVAHSTGINEQWTQCDKCSKWRKLPIDVLVPPKWTCTENLWDQNRSSCSAPNELNPRELDNLLRLNKEFKKQKVAASPRPLELESSGLDALANAAILGDDAGDPGSTPVATTTKHPRHRPGCSCIVCIQPPSGKGKHKPTCTCNVCMTVKRRFKTLMMRKKKRQSEREAEIAQRNQKSLGTKDEAEVDSTSLLTPVDGLENGARVPNELDSRSQNHIAEAAKGQLDLNCQPDREDMQAGLNNNVSMMSLLQEANLPLETYMKKNGITSLTLEQQTNSASNVPAPTTNESEGRHNEDCFTASAAHEQESSPEENSEQDKDQNNSHS 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0820 943 MobiDBLite consensus disorder prediction 779 802 - -
Lal14g0820 943 CDD B3_DNA 358 459 IPR003340 GO:0003677
Lal14g0820 943 Gene3D - 338 463 IPR015300 -
Lal14g0820 943 MobiDBLite consensus disorder prediction 889 906 - -
Lal14g0820 943 ProSiteProfiles B3 DNA-binding domain profile. 360 461 IPR003340 GO:0003677
Lal14g0820 943 Pfam B3 DNA binding domain 360 459 IPR003340 GO:0003677
Lal14g0820 943 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION REPRESSOR VAL1 39 895 - -
Lal14g0820 943 MobiDBLite consensus disorder prediction 889 943 - -
Lal14g0820 943 Pfam CW-type Zinc Finger 629 671 IPR011124 GO:0008270
Lal14g0820 943 ProSiteProfiles Zinc finger CW-type profile. 624 674 IPR011124 GO:0008270
Lal14g0820 943 SMART B3_2 360 460 IPR003340 GO:0003677
Lal14g0820 943 Gene3D - 627 683 - -
Lal14g0820 943 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 39 895 - -
Lal14g0820 943 SUPERFAMILY DNA-binding pseudobarrel domain 357 460 IPR015300 -
Lal14g0820 943 MobiDBLite consensus disorder prediction 926 943 - -
Lal14g0820 943 MobiDBLite consensus disorder prediction 777 805 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0820 Lal-Chr14 10294350 10303512 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g0820 37 894 B3 DNA Binding Superfamily AT4G32010 49.942 0.0 789
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lal14g0820 B3 1.5e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0820 - - gmx:100778833 1503.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g0820 14 10294350 10303512 Lal14g0820 14 10294350 10303512 ECH
Lal14g0820 14 10294350 10303512 Lal19g0290 19 2905235 2913462 LSH