Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0790 ATGAGTACTGTTGATGTTAGCGTTGGTTCTAGGCAAAGAGTGTTGCTAGAAATGGAACCGAAAGGAAGTGTGCTTATGCAGCGATATGAGCTAGGGAAATTATTAGGCCAAGGAACCTTTGCAAAGGTCTATCATGCAAGAAACATTATAACTGGCATGAGTGTGGCCATTAAAATGATTGATAAAGAAAAGGTTTCGAGTGTTGGGATGATTGAACAGATTAAGCGTGAAATTTCAGTAATGAGACTAATCAGACATCCAAATGTGGTTGAGCTTTATGAGGTAATGGCCAGCAAAGGCAAAATATACTTTGTCATGGAGTATGTGAAAGGTGGTGAGCTCTTCAACAAGGTAGCCAAAGGAAAGCTCAACCAGGATGTTGCTAGGAAATATTTTCAGCAATTGATCAGTGCTATCGACTACTGCCACAGCAGAGGTGTGTGTCATCGCGATCTAAAACCAGAAAATCTTTTATTGGATGAAAATGGAAATTTGAAGGTTTCAGATTTTGGATTGAGTGCTTTGGCTGAATCTAAGCACCAAGATGGATTGCTTCACACTACATGTGGTACCCCTGCCTATGTTGCTCCAGAAGTGATAAACAGAAAGGGTTATGATGGGGCCAAAGCTGATATCTGGTCATGTGGGGTTATCTTGTATGTTCTATTGGCCGGTTTTCTTCCTTTCAGAGATTCAAATCTGATGGAGATGTACAGGAAGATTGGTAAGGGAGACTTCAAATTTCCTAACTGGTTTGCTTCGGATGTACGCAGATTGTTGTCCAGAATCTTGGATCCAAACCCAAAAACGAGGATATCAGCGGCCAAAATTATGGAAAGTTCTTGGTTCAGAAGGGGGCTAGCGAAGCCTACTGTTATTGCCAATGATGACATAGAAGTAGCTCCTATGGATGCTGATGGAGTATTTGGAGCTTGTGAGAATGGTACTCCTGTGGCAGAGTCAATGCATGAACTGTCAAAACCTTGCAATTTAAATGCTTTTGATATCATCTCTTATTCATCAGGTTTTGACTTATCCAGTTTGTTTGAGGATACTGAACATAAGAAAGAAACGCGGTTTACTTCTGACAAGGCTGCCTCAATTATCATCTCTAAATTAGAAGAAATTTGTAAACGGCTTCCACTGAAAGTGAAGAAGAAAGATGGAGGTTTGTTCAAGTTGGAAGGTTCCAAGGAAGGCAGAAAAGGGCCTTTAGGTATAGATGCAGAGATTTTTGAGATTACACCTGTCTTCCATCTTGTGGAGTTAAAGAAGTCCAGTGGAGATACATTGGAGTACCAAAAGCTTCTAAAACAAGACATAAGACCTGCACTTAAGGACATTGTTTGGACATGGCAAGGAGAACAACCACAACAATTAGAGAATGGACTAGTCAAGATGGAGCAAAATCCTTCTCATTCTGGCCAACCAGAGTTTGTAACACAACCAAGTTCTTAA 1458 0.406 MSTVDVSVGSRQRVLLEMEPKGSVLMQRYELGKLLGQGTFAKVYHARNIITGMSVAIKMIDKEKVSSVGMIEQIKREISVMRLIRHPNVVELYEVMASKGKIYFVMEYVKGGELFNKVAKGKLNQDVARKYFQQLISAIDYCHSRGVCHRDLKPENLLLDENGNLKVSDFGLSALAESKHQDGLLHTTCGTPAYVAPEVINRKGYDGAKADIWSCGVILYVLLAGFLPFRDSNLMEMYRKIGKGDFKFPNWFASDVRRLLSRILDPNPKTRISAAKIMESSWFRRGLAKPTVIANDDIEVAPMDADGVFGACENGTPVAESMHELSKPCNLNAFDIISYSSGFDLSSLFEDTEHKKETRFTSDKAASIIISKLEEICKRLPLKVKKKDGGLFKLEGSKEGRKGPLGIDAEIFEITPVFHLVELKKSSGDTLEYQKLLKQDIRPALKDIVWTWQGEQPQQLENGLVKMEQNPSHSGQPEFVTQPSS 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0790 485 CDD CIPK_C 332 446 - -
Lal14g0790 485 CDD STKc_SnRK3 28 282 - -
Lal14g0790 485 ProSiteProfiles NAF domain profile. 326 350 IPR018451 GO:0007165
Lal14g0790 485 SMART serkin_6 29 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal14g0790 485 Gene3D Kinase associated domain 1, KA1 331 451 - -
Lal14g0790 485 ProSiteProfiles Protein kinase domain profile. 29 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal14g0790 485 Pfam NAF domain 328 386 IPR004041 GO:0007165
Lal14g0790 485 Gene3D Transferase(Phosphotransferase) domain 1 22 330 - -
Lal14g0790 485 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Lal14g0790 485 SUPERFAMILY Protein kinase-like (PK-like) 25 284 IPR011009 -
Lal14g0790 485 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 10 19 465 - -
Lal14g0790 485 Pfam Protein kinase domain 29 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal14g0790 485 ProSitePatterns Protein kinases ATP-binding region signature. 35 58 IPR017441 GO:0005524
Lal14g0790 485 PANTHER - 19 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0790 Lal-Chr14 9840179 9841848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g0790 18 458 CBL-interacting serine-threonine protein kinases AT5G58380 67.912 0.0 630
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lal14g0790 Pkinase 2e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0790 K07198 - gmx:100815651 806.594
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g0790 14 9840179 9841848 Lal4g1598 4 20158107 20160049 ECH
Lal14g0790 14 9840179 9841848 Lal14g0790 14 9840179 9841848 ECH
Lal14g0790 14 9840179 9841848 Lal18g1274 18 15353647 15355364 ECH
Lal14g0790 14 9840179 9841848 Lal5g1279 5 15489781 15491109 ECH
Lal14g0790 14 9840179 9841848 Lal3g0417 3 2892213 2893556 ECH
Lal1g2301 1 24926631 24927950 Lal14g0790 14 9840179 9841848 PCT