Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0779 ATGGCTTCTAGGTTGAGCAAAAAAGCTGATTTTCAACAACTTCGATCAGTCACAAATTCCATGGCTATGAACAAAGCCTCAATTATTGTGGATGCTACCAGATACATAGAGGAGTTGAAACAAAAAGTGGAGGGGCTGAACACAGAGCTTGGAGCTTCTGAATCATCAACCTCCCAAAATGAACTACCAATGGTCAAAGTAGAAACCCTACAAAGGGGTTTCTTCATTAATGTTTTTTCAGAAAAGAATTGCCCAAGTATGCTTGTTGCAATACTCGAGACCTTTGAGGAACTGGGGCTCGATGTGCTTGATGCTAGGGTTTCTTGTGAAGACACTTTCCAACTAGAAGCTGTGGGAGGAGAAAATCTAGAGAACGAAAGCATCGATGCACAAGTGGTGAAGCAAGCGGTGCTGCAAGCAATCAAGAACATGAATTAA 438 0.4201 MASRLSKKADFQQLRSVTNSMAMNKASIIVDATRYIEELKQKVEGLNTELGASESSTSQNELPMVKVETLQRGFFINVFSEKNCPSMLVAILETFEELGLDVLDARVSCEDTFQLEAVGGENLENESIDAQVVKQAVLQAIKNMN 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0779 145 Gene3D - 4 63 IPR036638 GO:0046983
Lal14g0779 145 CDD ACT_UUR-ACR-like 85 141 - -
Lal14g0779 145 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 8 145 - -
Lal14g0779 145 Coils Coil 29 56 - -
Lal14g0779 145 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 8 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0779 Lal-Chr14 9661669 9663371 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g0779 14 139 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G10570 31.655 9.36e-06 42.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0779 - - gmx:100499821 224.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g0779 14 9661669 9663371 Lal22g0200 22 1249704 1251233 ECH
Lal14g0779 14 9661669 9663371 Lal4g1597 4 20152849 20155499 ECH
Lal14g0779 14 9661669 9663371 Lal14g0779 14 9661669 9663371 ECH
Lal14g0779 14 9661669 9663371 Lal5g1019 5 12581940 12583783 ECH
Lal14g0779 14 9661669 9663371 Lal3g0659 3 5146772 5153474 ECH