LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal14g0729	ATGACACTCTCTCCGTTACTCTCTCTTCTTTTCTATTTTTACTTCTTCCGTTCCGTACTTTCTCTTTCCTCTGACGGACTTGCCCTTCTCTCTCTAAAGTCCTCTGTTGACCAAAATTCCGGCACCGCCGCGTTCACCGATTGGGACGACGGCGATCCCACCCCGTGTCGCTGGGAAGGCATCTCCTGCGCCAACATCTCCAACGAGCCCCGTGTGGTTGGAATCGCACTTGCCGGAAAATCACTCCGCGGCTATATTCCATCGGAGTTAGGTTCCCTTCGCTACCTCCGCCGCCTCAACCTCCACGATAACGCCTTCTACGGCTTCATCCCCGTTAACCTCTCCAATGCCACCGCACTCCACAGCCTCTTCCTCCATCGCAACAACCTCTCCGGCCCCTTCCCTTCCTCCCTCTGCACCATCCCCCGCCTCGAAAACCTCGACATCTCCGACAACTCCTTCTCCGGCGAAATTCCCCTCCAGCTCAACAACTGTAAAATTCTCCAGAGGCTCATCCTCGCCCGTAACAACTTCTCCGGCAATATCCCTACCGGCGTGTGGCCGGAATTACATAATCTCGTGGAACTCGATCTCTCCGAGAACGATCTAGAAGGTTCGATTCCAGAAGAAATCAGTGAACTCAAATCCCTCGCCGGAACACTAAACCTTTCTTTCAACCATCTCTCCGGTAAGGTACCAAAATCTCTCGGAAAATTACCTTCTACCGCGAGCTTCGATCTCAGTAACAATAACCTAACCGGCCAAATACCCGAAATGGGGTCGTTTTCAAACCAAGGACCCACCGCGTTTCTAAATAACCCTTTCCTCTGCGGTTTCCCTCTCCGAAAAGCATGCTCTAATTCAAAACACGGTTCATTAAATAGCACCGGTTCGAACCGTGAACCGGGTTCAAACAACAAAGGGTTAAGTCCCGGTTTAATTATAATTATATCAGTGGGGGATGCTGTTGGAGTAGCTTTAGTTGGGCTTGTGATTGTTTACGTTTATTGGAAGAAAAAAGATTATCATAATTCTAATATTTATGATAATGAGAAAGGAAAGAGTATTAATGTGTGTGATGGTAATGGTTTACCATGCATGAATGGTGGATTTTCAATGAGTGATGATGATGATGATGAAGTGGAGGGAAATGGGGGTTTGGTGAGCATAGATAAAGGTTTTAGTTTTGAGCTAGATGAGCTTTTAAGAGCTTCGGCTTATGTATTGGGGAAAAGTGGATTGGGGATTGTGTATAAGGTTGTGTTAGGAAATGGAATGCCTGTGGCTGTGAGAAGATTGGGTGAGGGTGGAGAAGAAAGGTATAAGGAGTTTGCAGCAGAGGTGATAGCCATTGGGAAGGTTAAACATCCTAATATTGTGAGGTTGAGAGCTTTTTATTGGGCACATGATGAAAAGCTACTCATAACTGATTTTATCAACAATGGCAATATGGCTAATGCACTTCGAGGGAGAAATGGCCAACCATCTTCAAACCTTTCATGGTCTACCAGGCTAAGAATCGCCAAAGGAATAGCAAGGGGCTTGGCCTATCTTCATGAATGCAGTCCTAGAAAATTTGTCCATGGCGACATCAAACCCACTAATATACTACTTGACAATGACTTCCAACCTTACGTTTCGGATTTCGGCCTTAGCCGGTTGATTAGCATCACTGGCAACAACCCCTCTACCGGTGGCTTAATGGGTGGAGCTCTGCCATATATGAAGTCATACTCATCACAAAAAGAGAGATCAAGCAACAATTACAAAGCGCCCGAGGCTCGAGTCAGTTGCTGCAAACCAACCCAGAAATGGGATGTGTATTCATTTGGGGTTGTATTGCTTGAATTGCTAACTGGAAAGTCACCTGAGTCCTCTCCTACAACATCAACTTCTATGGAAGTCCCTGACTTGGTGAGGTGGGTCAGAAAAGGGTTTGATCAAAATAGCCCATTATCAGAAATGGTTGATGCATCTCTGCTACAAGAAGTGCGTGTCAAGAAAGAGGTATTGGCTGTGTTTCATGTAGCATTAGCATGCACTGAGGATGACCCTGAAGTTCGGCCTAGAATGAAAAATGTCTCTGAAAATGTTGAGAAGATTGGAAATTAA	2112	0.4598	MTLSPLLSLLFYFYFFRSVLSLSSDGLALLSLKSSVDQNSGTAAFTDWDDGDPTPCRWEGISCANISNEPRVVGIALAGKSLRGYIPSELGSLRYLRRLNLHDNAFYGFIPVNLSNATALHSLFLHRNNLSGPFPSSLCTIPRLENLDISDNSFSGEIPLQLNNCKILQRLILARNNFSGNIPTGVWPELHNLVELDLSENDLEGSIPEEISELKSLAGTLNLSFNHLSGKVPKSLGKLPSTASFDLSNNNLTGQIPEMGSFSNQGPTAFLNNPFLCGFPLRKACSNSKHGSLNSTGSNREPGSNNKGLSPGLIIIISVGDAVGVALVGLVIVYVYWKKKDYHNSNIYDNEKGKSINVCDGNGLPCMNGGFSMSDDDDDEVEGNGGLVSIDKGFSFELDELLRASAYVLGKSGLGIVYKVVLGNGMPVAVRRLGEGGEERYKEFAAEVIAIGKVKHPNIVRLRAFYWAHDEKLLITDFINNGNMANALRGRNGQPSSNLSWSTRLRIAKGIARGLAYLHECSPRKFVHGDIKPTNILLDNDFQPYVSDFGLSRLISITGNNPSTGGLMGGALPYMKSYSSQKERSSNNYKAPEARVSCCKPTQKWDVYSFGVVLLELLTGKSPESSPTTSTSMEVPDLVRWVRKGFDQNSPLSEMVDASLLQEVRVKKEVLAVFHVALACTEDDPEVRPRMKNVSENVEKIGN	703

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal14g0729	703	Gene3D	Ribonuclease Inhibitor	22	187	IPR032675	-
	Lal14g0729	703	Pfam	Leucine rich repeat N-terminal domain	23	63	IPR013210	-
	Lal14g0729	703	ProSiteProfiles	Protein kinase domain profile.	403	703	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lal14g0729	703	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	526	538	IPR008271	GO:0004672\|GO:0006468
	Lal14g0729	703	SUPERFAMILY	Protein kinase-like (PK-like)	408	696	IPR011009	-
	Lal14g0729	703	PANTHER	LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED	5	702	-	-
	Lal14g0729	703	Gene3D	Ribonuclease Inhibitor	190	283	IPR032675	-
	Lal14g0729	703	PANTHER	-	5	702	-	-
	Lal14g0729	703	CDD	STKc_IRAK	409	701	-	-
	Lal14g0729	703	SMART	serkin_6	407	696	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lal14g0729	703	Pfam	DNA binding protein S1FA	305	340	IPR006779	GO:0003677\|GO:0005634\|GO:0006355
	Lal14g0729	703	Gene3D	Phosphorylase Kinase; domain 1	392	478	-	-
	Lal14g0729	703	Pfam	Protein kinase domain	408	637	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lal14g0729	703	Gene3D	Transferase(Phosphotransferase) domain 1	479	703	-	-
	Lal14g0729	703	SUPERFAMILY	L domain-like	24	282	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal14g0729	Lal-Chr14	8760193	8766916	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lal14g0729	20	701	Receptor kinase-like Gene Family	AT1G67510	64.316	0.0	884

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-III	Lal14g0729		Pkinase	1.2e-33	CL0016
	TF	S1Fa-like	Lal14g0729		Pkinase	1.2e-33	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal14g0729	-		-	gmx:100787556	1019.61