Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0680 ATGGTAAGCATCCGCTTAGATGAAATTAGTAAAATTATCCGTGAACGTATTGAGCAATATAATACCGAAGCAAAGATTGTAAATATTGGTACCGTACTTCAAGTAGGCAATGGCATTGCTCGTATTTATGGTCTTGATGAAGTAATGGCGGGTGAATTAGTGGAATTTGAAGAGGGTACTATAGGCATTGCTTTGAATTTGGAATCAAGTAATGTTGGTGTTGTATTAATGGGTGATGGTTTGATGATACAAGAGGGAAGTTCGGTAAAAGCAACAGGAAGAATTGCTCAGATACTATTAAGTGAGGCTTATTTGGGTCGTGTTATAAATGCTCTGGCTAAACCTATTGATGGTCGAGGAGAAATTTCAGCTTTGGAATCTCGCTTAATTGAATCTCCTGCTCCTGGTATTATTTCGAGACGGTCCGTATATGAGTCTCTTCAAACAGGACTTATTGCTATTGATTCAATTATCCCTATAGGGCGCGGTCAACGAGAATTAATTATTGGGGACAAACAAACGGAATCTTATGTGGCTCAAGTGGTGACTGCTTTACAAGAAAGGGGAGCAATGGAATATACTATTGTAGTAGCTGAAACGGCGGATTTTCCAGCTACATTACAATACCTCGCTCCTTATACAAGAGCAACTTTGGCTGAATATTTTATGTACCGCGAACGCCACACCTTAATCATTTATGACGATCCCTCCAAACAAGCACATGCTTATCGCCAAATGTCTCTTCTATTACGAAGACCGCTGGGTCACGAAGCTTATCCGGAAGATGTTTTTTATTTGCACTCAAGTCTTTTGGAAACAGCCACTAAATCAAGTTCTCAGTTAGGTGAAGGAAGTATGACTACTTTACCAATAGTTGAGACCCAATCGGGAGATGTTTCCGCTTATATTCCTACTAATGTAATTTCCATTACAGATGGCCAAATATTCTTATCCGCAGATCTATTCAATGCTGAAATCAGACCTGCAATTAATGTGGGTATTTCTGTTTCCAGAGTTGGATCGGCAGCTCAAATTAAAGCCATGAAACAAGTAGCTGGTAAATTAAAATTAGAATTGGCACAATTTGCAGAATTAGAAGCTTTTGCACAATTCGCTTCTGATCTCGATAAAGCTACTCAAAATCAATTGGAGAGAGGTCAACGATTGCGCGAATTACTTAAACAATCCCAATTGGCTCCTCTCACTGTGGAAGAGCATATAATAACTATTTATACCGGAACGAATGGTTATCTTGATTCATTAGAAATTGGACAGGTAAGTAAATTTCTAGTTGAGTTACGTGCTTACTTAAAAACGAATAAACCTCAAGTCCAACAAATCATATCTTCTACCAAGACATTCACTACATAA 1371 0.3837 MVSIRLDEISKIIRERIEQYNTEAKIVNIGTVLQVGNGIARIYGLDEVMAGELVEFEEGTIGIALNLESSNVGVVLMGDGLMIQEGSSVKATGRIAQILLSEAYLGRVINALAKPIDGRGEISALESRLIESPAPGIISRRSVYESLQTGLIAIDSIIPIGRGQRELIIGDKQTESYVAQVVTALQERGAMEYTIVVAETADFPATLQYLAPYTRATLAEYFMYRERHTLIIYDDPSKQAHAYRQMSLLLRRPLGHEAYPEDVFYLHSSLLETATKSSSQLGEGSMTTLPIVETQSGDVSAYIPTNVISITDGQIFLSADLFNAEIRPAINVGISVSRVGSAAQIKAMKQVAGKLKLELAQFAELEAFAQFASDLDKATQNQLERGQRLRELLKQSQLAPLTVEEHIITIYTGTNGYLDSLEIGQVSKFLVELRAYLKTNKPQVQQIISSTKTFTT 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0680 456 ProSitePatterns ATP synthase alpha and beta subunits signature. 328 337 IPR020003 GO:0005524
Lal14g0680 456 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 98 343 IPR027417 -
Lal14g0680 456 Gene3D - 97 175 IPR027417 -
Lal14g0680 456 Gene3D - 176 344 IPR027417 -
Lal14g0680 456 CDD ATP-synt_F1_alpha_C 348 455 IPR000793 GO:0015986
Lal14g0680 456 Gene3D - 345 456 IPR038376 -
Lal14g0680 456 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 345 455 - -
Lal14g0680 456 Gene3D - 3 94 IPR023366 -
Lal14g0680 456 Pfam ATP synthase alpha/beta chain, C terminal domain 344 455 IPR000793 GO:0015986
Lal14g0680 456 PANTHER ATP SYNTHASE SUBUNIT ALPHA, CHLOROPLASTIC 1 175 - -
Lal14g0680 456 PANTHER ATP SYNTHASE SUBUNIT ALPHA, CHLOROPLASTIC 174 455 - -
Lal14g0680 456 SUPERFAMILY N-terminal domain of alpha and beta subunits of F1 ATP synthase 11 95 IPR036121 GO:0046034|GO:1902600
Lal14g0680 456 Pfam ATP synthase alpha/beta family, beta-barrel domain 29 93 IPR004100 GO:0046034|GO:1902600
Lal14g0680 456 PANTHER ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 1 175 - -
Lal14g0680 456 PANTHER ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL 174 455 - -
Lal14g0680 456 Hamap ATP synthase subunit alpha [atpA]. 2 455 IPR005294 GO:0015986|GO:0045261|GO:0046933
Lal14g0680 456 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 175 337 IPR000194 GO:0005524
Lal14g0680 456 CDD ATP-synt_F1_alpha_N 28 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0680 Lal-Chr14 7907342 7908795 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g0680 61 343 Primary Pumps ATPases(2) AT1G20260 26.822 2.59e-18 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0680 K02111 - jre:26380896 739.184