Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0659 ATGAGCAAAAATACTACCACTTCGGATCCCAAGTTTTCTGCGTTTCAAAAAGAAAACCCGGGACGTATCGCCCAAATAATTGGTCCGGTACTGGATGTATCTTTTCCCCCGGGGAAGATGCCGAATATTTACAACGCTCTGATAGTTAAGGGACAAGATACTGTTGGTCAACAAATTAACATTACTTGTGAAGTACAGCAATTATTAGGAAATAATCGAATCAGAGCTGTAGCTATGAGTGCTACAGAGGGTCTAATGAGAGGAATGGAAGTGATTGACACAGGGGCTCCTCTAAGTGTTCCAGTCGGCGGAGCAACTCTAGGACGCATTTTCAACGTGCTTGGAGAGCCTATTGACAATTTAGGTCCTGTAGATACTCGCACAACATCTCCTATTCATCGATCCGCACCTGCCTTTATACAATTAGATACAAAATTATCCATTTTTGAAACAGGGATTAAAGTAGTCGATCTTTTAGCTCCCTATCGCCGTGGAGGAAAAATAGGACTTTTCGGTGGAGCTGGAGTGGGTAAAACAGTACTCATTATGGAATTGATCAATAACATTGCCAAAGCTCATGGGGGTGTATCTGTTTTTGGCGGAGTAGGTGAACGTACTCGTGAGGGAAATGATCTTTACATGGAAATGAAAGAATCTGGAGTAATTAATGAACAAAATATTGCAGAATCAAAAGTGGCTCTAGTCTACGGTCAAATGAATGAACCGCCTGGAGCTCGTATGAGAGTTGGGTTAACTGCCCTAACTATGGCGGAATATTTCCGGGATGTCAATGAACAAGACGTACTTCTATTTATCGACAATATCTTCCGTTTCGTTCAAGCAGGATCCGAAGTATCTGCTTTATTGGGTAGAATGCCTTCTGCTGTGGGTTATCAACCCACCCTTAGTACCGAAATGGGTTCTTTACAAGAAAGAATTACTTCTACCAAAGAAGGGTCCATAACTTCTATTCAAGCAGTTTATGTACCTGCGGACGATTTGACCGATCCTGCTCCTGCCACGACATTTGCACATCTCGATGCCACTACCGTACTATCAAGAGGATTAGCTGCCAAAGGTATCTATCCAGCAGTAGATCCTTTAGATTCAACGTCAACTATGCTCCAACCTAGGATCGTTGGCGAAGAACATTATGAAACTGCCCAAAGAGTTAAACAAACCTTACAGCGTTACAAAGAACTTCAGGACATTATAGCTATCCTTGGGTTGGACGAATTATCCGAAGAGGATCGCTTAACCGTAGCAAGAGCACGAAAAATTGAGCGTTTCTTATCACAGCCCTTTTTTGTAGCAGAAGTATTTACCGGTTCACCGGGGAAATATGTTGGTCTAGCAGAAACAATTAGAGGCTACCGCGAAGGCTACGAACTTAGAAAAGGAGAGCAAATTGAAGAAATGACTTTAAATCTTTGTGTATTGACCCCAAATCGAATTGTTTGGGATTCAGAAGTGAAGGAAATTATTTTATGTACTAATAGTGGACAAATTGGAGTATTACCCAATCATGCGCCTATTGCCACAGCTGTAGATATAGGTATTTTGAGAATACGCCGTAATGACCAATGGTTAACGATGGCTCTGATGGGCGGTTTTGCTAGAATAGGCAATAATGAAATCACTATTTTAGTAAATGATGCGGAAAAGGGTAGTGATATTGATCCACAAGAAGCCCAACAAACCCTTGAAATAGCCGAAGCTAACTTGAGTAAAGCTGAAGGCAAAAGAAAAACAATTGAGGCAAATCTAGCTCTCAGACGAGCTAGAACACGAGTGGAGGCTATCAATATTATTGCGTAA 1818 0.4158 MSKNTTTSDPKFSAFQKENPGRIAQIIGPVLDVSFPPGKMPNIYNALIVKGQDTVGQQINITCEVQQLLGNNRIRAVAMSATEGLMRGMEVIDTGAPLSVPVGGATLGRIFNVLGEPIDNLGPVDTRTTSPIHRSAPAFIQLDTKLSIFETGIKVVDLLAPYRRGGKIGLFGGAGVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEQNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIVGEEHYETAQRVKQTLQRYKELQDIIAILGLDELSEEDRLTVARARKIERFLSQPFFVAEVFTGSPGKYVGLAETIRGYREGYELRKGEQIEEMTLNLCVLTPNRIVWDSEVKEIILCTNSGQIGVLPNHAPIATAVDIGILRIRRNDQWLTMALMGGFARIGNNEITILVNDAEKGSDIDPQEAQQTLEIAEANLSKAEGKRKTIEANLALRRARTRVEAINIIA 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0659 605 Gene3D - 18 97 - -
Lal14g0659 605 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 152 372 IPR000194 GO:0005524
Lal14g0659 605 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 473 554 IPR036771 -
Lal14g0659 605 CDD ATP-synt_F1_beta_C 379 460 - -
Lal14g0659 605 SUPERFAMILY N-terminal domain of alpha and beta subunits of F1 ATP synthase 20 97 IPR036121 GO:0046034|GO:1902600
Lal14g0659 605 Pfam ATP synthase, Delta/Epsilon chain, long alpha-helix domain 558 601 IPR020547 -
Lal14g0659 605 PANTHER F0F1-TYPE ATP SYNTHASE, BETA SUBUNIT 1 459 - -
Lal14g0659 605 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 475 553 IPR020546 GO:0015986
Lal14g0659 605 Hamap ATP synthase subunit beta [atpB]. 18 490 IPR005722 GO:0015986|GO:0045261|GO:0046933
Lal14g0659 605 PANTHER ATP SYNTHASE 1 459 - -
Lal14g0659 605 SUPERFAMILY C-terminal domain of alpha and beta subunits of F1 ATP synthase 375 460 - -
Lal14g0659 605 Gene3D - 561 605 - -
Lal14g0659 605 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 99 377 IPR027417 -
Lal14g0659 605 TIGRFAM ATP_synt_epsi: ATP synthase F1, epsilon subunit 474 602 IPR001469 GO:0015986|GO:0045261|GO:0046933
Lal14g0659 605 ProSitePatterns ATP synthase alpha and beta subunits signature. 363 372 IPR020003 GO:0005524
Lal14g0659 605 Gene3D - 98 374 IPR027417 -
Lal14g0659 605 CDD ATP-synt_F1_beta_N 19 98 - -
Lal14g0659 605 Pfam ATP synthase alpha/beta family, beta-barrel domain 23 95 IPR004100 GO:0046034|GO:1902600
Lal14g0659 605 Coils Coil 568 588 - -
Lal14g0659 605 CDD F1-ATPase_beta 97 377 - -
Lal14g0659 605 CDD F1-ATPase_delta 475 595 IPR001469 GO:0015986|GO:0045261|GO:0046933
Lal14g0659 605 TIGRFAM atpD: ATP synthase F1, beta subunit 21 460 IPR005722 GO:0015986|GO:0045261|GO:0046933
Lal14g0659 605 Gene3D - 475 559 IPR036771 -
Lal14g0659 605 SMART AAA_5 164 356 IPR003593 -
Lal14g0659 605 Gene3D - 375 474 IPR024034 -
Lal14g0659 605 Hamap ATP synthase epsilon chain [atpC]. 473 600 IPR001469 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0659 Lal-Chr14 7754797 7756691 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g0659 94 429 Primary Pumps ATPases(2) AT1G20260 27.049 7.53e-27 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0659 K02112 - han:118484095 1031.94