Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0621 ATGTTTGGTAAAAGAATAATCTTCTCCTTTGCTTTGAGAATAATCAAAAAGGAAAGTGTTCAATTGGAACATGAAAACGTGACTGAATTGGTCCTAGTTACTCTTCGGGACGGAGTGGAAGAAGGGGGGAGATTCTCGAACGAGGAAAAGGATCCAATGACTTCGAAAGAATTGAATGAGGAGCCTAAGAGGGGGAGGGTTAAGGATTTACCCGGTGTGAGATATCACATTGTTCGAGGAACCCTAGATGCTGTCGGAGTAAAGGATCGTCAACAAGGGCGTTCTAGTGCGTTTTATAAAAAAACGGATTCCCCTTTCACGCTCATGTCACGGCGAGGTACTGCAGAAGAAAAAACCGCAAAATCCGATCCCATTTTTCGTAATCGATTAGTTAACATGTTGGTTAATCGTATTCTGAAACACGGAAAAAAATCATTGGCTTATCAAATTATCTATCGAGCTATGAAAAAGATTCAACAAAAGACAGAAACAAATCCACTATCTGTTTTACGTCAAGCAATACGTGGAGTAACTCCCGATATAGCAGTAAAAGCAAGACGTGTAGGCGGATCGACTCATCAAGTTCCCATTGAAATAGGATCCACACAAGGAAAAGCACTTGCCATTCGTTGGTTATTAGGGGCATCCCGAAAACGTCCGGGTCGAAATATGGCTTTCAAATTAAGTTCCGAATTAGTGGATGCTGCCAAAGGGAGTGGCGATGCCATACGCAAAAAGGAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCTTTTGCACATTTTCGTTAA 792 0.4179 MFGKRIIFSFALRIIKKESVQLEHENVTELVLVTLRDGVEEGGRFSNEEKDPMTSKELNEEPKRGRVKDLPGVRYHIVRGTLDAVGVKDRQQGRSSAFYKKTDSPFTLMSRRGTAEEKTAKSDPIFRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0621 263 PANTHER RIBOSOMAL PROTEIN S7 109 263 IPR000235 GO:0006412
Lal14g0621 263 Gene3D - 43 103 IPR012340 -
Lal14g0621 263 PANTHER 30S RIBOSOMAL PROTEIN S7, CHLOROPLASTIC 109 263 - -
Lal14g0621 263 ProSitePatterns Ribosomal protein S7 signature. 128 154 IPR020606 GO:0003723|GO:0003735|GO:0006412
Lal14g0621 263 Gene3D Ribosomal protein S7 domain 109 263 IPR036823 -
Lal14g0621 263 Pfam Ribosomal protein S7p/S5e 109 257 IPR023798 -
Lal14g0621 263 CDD uS7_Chloroplast 118 262 - -
Lal14g0621 263 MobiDBLite consensus disorder prediction 42 63 - -
Lal14g0621 263 PRINTS Ribosomal protein S12 signature 57 74 IPR006032 GO:0003735|GO:0005840|GO:0006412
Lal14g0621 263 PRINTS Ribosomal protein S12 signature 74 90 IPR006032 GO:0003735|GO:0005840|GO:0006412
Lal14g0621 263 PRINTS Ribosomal protein S12 signature 90 102 IPR006032 GO:0003735|GO:0005840|GO:0006412
Lal14g0621 263 SUPERFAMILY Ribosomal protein S7 110 257 IPR036823 -
Lal14g0621 263 TIGRFAM rpsG_bact: ribosomal protein uS7 111 263 IPR005717 GO:0003735|GO:0006412|GO:0015935
Lal14g0621 263 Hamap 30S ribosomal protein S7 [rpsG]. 109 263 IPR005717 GO:0003735|GO:0006412|GO:0015935
Lal14g0621 263 SUPERFAMILY Nucleic acid-binding proteins 64 97 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0621 Lal-Chr14 7662461 7664042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g0621 130 257 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 34.532 9.96e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0621 K02992 - rcu:125368941 305.834