Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0524 ATGTCACGGCGAGGTACTGCAGAAGAAAAAACCGCAAAATCCGATCCCATTTTTCGTAATCGATTAGTTAACATGTTGGTTAATCGTATTCTGAAACACGGAAAAAAATCATTGGCTTATCAAATTATCTATCGAGCTATGAAAAAGATTCAACAAAAGACAGAAACAAATCCACTATCTGTTTTACGTCAAGCAATACGTGGAGTAACTCCCGATATAGCAGTAAAAGCAAGACGTGTAGGCGGATCGACTCATCAAGTTCCCATTGAAATAGGATCCACACAAGGAAAAGCACTTGCCATTCGTTGGTTATTAGGGGCATCCCGAAAACGTCCGGGTCGAAATATGGCTTTCAAATTAAGTTCCGAATTAGTGGATGCTGCCAAAGGGAGTGGCGATGCCATACGCAAAAAGGAAGAGACTCATAGAATGGCAGAGGCAAATAGAGCTTTTGCACATTTTCGTTAA 468 0.4081 MSRRGTAEEKTAKSDPIFRNRLVNMLVNRILKHGKKSLAYQIIYRAMKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRVGGSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRNMAFKLSSELVDAAKGSGDAIRKKEETHRMAEANRAFAHFR 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0524 155 Gene3D Ribosomal protein S7 domain 1 155 IPR036823 -
Lal14g0524 155 CDD uS7_Chloroplast 10 154 - -
Lal14g0524 155 PIRSF RPS7p_RPS7a_RPS5e_RPS7o 2 155 IPR000235 GO:0006412
Lal14g0524 155 Hamap 30S ribosomal protein S7 [rpsG]. 1 155 IPR005717 GO:0003735|GO:0006412|GO:0015935
Lal14g0524 155 PANTHER 30S RIBOSOMAL PROTEIN S7, CHLOROPLASTIC 1 155 - -
Lal14g0524 155 TIGRFAM rpsG_bact: ribosomal protein uS7 3 155 IPR005717 GO:0003735|GO:0006412|GO:0015935
Lal14g0524 155 PANTHER RIBOSOMAL PROTEIN S7 1 155 IPR000235 GO:0006412
Lal14g0524 155 ProSitePatterns Ribosomal protein S7 signature. 20 46 IPR020606 GO:0003723|GO:0003735|GO:0006412
Lal14g0524 155 SUPERFAMILY Ribosomal protein S7 2 149 IPR036823 -
Lal14g0524 155 Pfam Ribosomal protein S7p/S5e 1 149 IPR023798 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0524 Lal-Chr14 7461687 7462154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g0524 22 149 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 34.532 1.49e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0524 K02992 - egr:9829731 301.597