Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0492 ATGACCCGTAGGCCTTCTACCTCCACTCGACATTACTCCGTCAGGCTTTCGCCCCTTGCGGAAAATTCCCCACTATTGCCTCCCGTAGGAGTCTGGGCCATGTCTCAGTCCAGTGTGGCTGATCATCCTCTCGGACCAGCTACTGATCATCGCCTTGGTTCTTACGCGTTACTCACTCGTCCGCCATTGGAAACACCACTTCCCATCCGACTTGCATGTGAAAGTGTTCAATTGGAACATGAAAACGTGACTAAATTGGTCCTAGTTACTCTTCGGGACGGAGTGGAAGAAGGGGGGAGATTCTCGAACGAGGAAAAGGATCCAATGACTTCGAAAGAATTGAATAAGGAGTCGTATGAAGTGAAAATCTCATGTTCGGTTCTGTTGAGTGGCAGTAAGGGTGACTTATCTGTCAACTTTTCCACTATCACCCCAAAAAAACCAAACTCTGCCTTACGTAAAGTTGCCAGAGTACGCTTAACCTCTGGATTTGAAATCACTGCTTATATACCCGGTATTGGTCATAATTTACAAGAACATTTTGTAGTCTTAGTAAGAGGGGGAGTTAAGGATTTACCCGGTGTGAGATATCACATTGTTCGAGGAACCCTATATGCTATCGGAGTAAAGGATCGTCAACAAGGGCGTTCTAGTGCGTTGTAG 663 0.463 MTRRPSTSTRHYSVRLSPLAENSPLLPPVGVWAMSQSSVADHPLGPATDHRLGSYALLTRPPLETPLPIRLACESVQLEHENVTKLVLVTLRDGVEEGGRFSNEEKDPMTSKELNKESYEVKISCSVLLSGSKGDLSVNFSTITPKKPNSALRKVARVRLTSGFEITAYIPGIGHNLQEHFVVLVRGGVKDLPGVRYHIVRGTLYAIGVKDRQQGRSSAL 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0492 220 TIGRFAM rpsL_bact: ribosomal protein uS12 130 217 IPR005679 GO:0003735|GO:0006412|GO:0015935
Lal14g0492 220 PRINTS Ribosomal protein S12 signature 145 160 IPR006032 GO:0003735|GO:0005840|GO:0006412
Lal14g0492 220 PRINTS Ribosomal protein S12 signature 161 180 IPR006032 GO:0003735|GO:0005840|GO:0006412
Lal14g0492 220 PRINTS Ribosomal protein S12 signature 196 212 IPR006032 GO:0003735|GO:0005840|GO:0006412
Lal14g0492 220 PRINTS Ribosomal protein S12 signature 212 220 IPR006032 GO:0003735|GO:0005840|GO:0006412
Lal14g0492 220 Pfam Ribosomal protein S12/S23 137 212 IPR006032 GO:0003735|GO:0005840|GO:0006412
Lal14g0492 220 CDD Ribosomal_S12 142 212 IPR005679 GO:0003735|GO:0006412|GO:0015935
Lal14g0492 220 PANTHER 30S RIBOSOMAL PROTEIN S12-B 112 219 - -
Lal14g0492 220 PANTHER 30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER 112 219 IPR006032 GO:0003735|GO:0005840|GO:0006412
Lal14g0492 220 Gene3D - 87 219 IPR012340 -
Lal14g0492 220 SUPERFAMILY Nucleic acid-binding proteins 138 217 IPR012340 -
Lal14g0492 220 ProSitePatterns Ribosomal protein S12 signature. 146 153 IPR006032 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0492 Lal-Chr14 7380422 7383127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g0492 143 201 Cytoplasmic Ribosomal Protein Gene Family AT3G09680 41.176 1.13e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0492 K02950 - zju:107431568 215.312