Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0420 ATGGATAGCGAAGGAAGCAGAAGATTAACTACAAATGATGCTTTATTATATCTTAAAGAAATAAAGACCGTATTTACTGAAGACGTGGAAAAGTATGAATACTTTTTGAAAATATTGATAGACTTCAAAGAAAACAGAATTGGTAGAAATGATGTTATAGAAGCTGCCAAGGATTTATTCAAAGGACATGATCATCTATTGTTGGGGTTAAACAACTTTCTTCCAAGGGGTTATGAAATCCAACTTCTGTAA 252 0.3175 MDSEGSRRLTTNDALLYLKEIKTVFTEDVEKYEYFLKILIDFKENRIGRNDVIEAAKDLFKGHDHLLLGLNNFLPRGYEIQLL 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0420 83 Pfam Paired amphipathic helix repeat 30 74 IPR003822 GO:0006355
Lal14g0420 83 PANTHER SIN3B-RELATED 5 82 IPR039774 GO:0003714
Lal14g0420 83 ProSiteProfiles PAH domain profile. 7 77 IPR003822 GO:0006355
Lal14g0420 83 SUPERFAMILY PAH2 domain 7 76 IPR036600 GO:0006355
Lal14g0420 83 Gene3D Paired amphipathic helix 13 75 IPR036600 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0420 Lal-Chr14 5983393 5983737 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g0420 9 83 WRKY Transcription Factor Family AT4G12020 52.000 3.74e-18 75.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lal14g0420 PAH 8.1e-12 No_clan