Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0414 ATGGATAGCGAAGGAAGCAGAAGATTAACTACAAATGATGTTTTATTATATCTTAAAGAAATAAAGACCGTATTTACTGAAGACATGGAAAAGTATGAATACTTTTTGAAAATATTGATAGACTTCAAAGAAAACAGAATTGGTAGAAATGATGTTATAGAAGCTGCCAAGGATTTATTCAAAGGACATGATCATCTACTGTTGGGGTTAAACAACTTTCTTCCAAGGGGTTATGAAATCCAACTTCCGTTAGTAAATGAAGAATCATCTGAGCCAGTTCTTGGAATTCAAGATCCAACCGATTTCAAGAATAAGTTTAAGGCTCGCTTTGAAGAAAATTCTCATGTATATGAGTCTTTTCTAGATATTATCAAAAAATTGGAAGCCGGGGAAAAATCTACAACCGAGGCTCAAGAAGAGATTGCTGCACTATTGGAGGGCCATGAAGATCTCCTTCATGAGTTAGTTCACTTTCTTCCTGGTGCTTCAGGATCAGCCTCTACCTAA 507 0.357 MDSEGSRRLTTNDVLLYLKEIKTVFTEDMEKYEYFLKILIDFKENRIGRNDVIEAAKDLFKGHDHLLLGLNNFLPRGYEIQLPLVNEESSEPVLGIQDPTDFKNKFKARFEENSHVYESFLDIIKKLEAGEKSTTEAQEEIAALLEGHEDLLHELVHFLPGASGSAST 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0414 168 SUPERFAMILY PAH2 domain 7 76 IPR036600 GO:0006355
Lal14g0414 168 Pfam Paired amphipathic helix repeat 115 159 IPR003822 GO:0006355
Lal14g0414 168 Pfam Paired amphipathic helix repeat 30 74 IPR003822 GO:0006355
Lal14g0414 168 SUPERFAMILY PAH2 domain 95 160 IPR036600 GO:0006355
Lal14g0414 168 Gene3D Paired amphipathic helix 98 160 IPR036600 GO:0006355
Lal14g0414 168 Gene3D Paired amphipathic helix 13 75 IPR036600 GO:0006355
Lal14g0414 168 ProSiteProfiles PAH domain profile. 92 162 IPR003822 GO:0006355
Lal14g0414 168 PANTHER SIN3B-RELATED 5 162 IPR039774 GO:0003714
Lal14g0414 168 ProSiteProfiles PAH domain profile. 7 77 IPR003822 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0414 Lal-Chr14 5839059 5840139 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g0414 9 111 WRKY Transcription Factor Family AT4G12020 42.308 1.71e-15 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lal14g0414 PAH 3.9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0414 K11644 - lang:109341642 236.498