Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0407 ATGGAAAAGTATGAATACTTTTTGAAAATATTGATAGACTTCAAAGAAAACAGAATTGGTAGAAATGATGTTATAGAAGCTGCCAAGGATTTATTCAAAGGACATGATCATCTACTGTTGGGGTTAAACAACTTTCTTCCAAGGGGTTATGAAATCCAACTTCCGTTAGTAAATGAAGAATCATCTGAGCCAGTTCTTGGAATTCAAGATCCAACCGATTTCAAGAATAAGTTTAAGGCTCGCTTTGAAGAAAATTCTCATATATATGAGTCTTTTCTAGATATTATCAAAAAATTGGAAGCCGGGGAAAAATCTACAACCGAGGCTCAAGAAGAGATTGATGCACTATTGGAGGGCCATGAAGATCTCCTTCATGAGTTAGTTCACTTTCTTCCTGGTGCTTCAGGATCAGCCTCTACCGAAGTATATGATAGCCCTTCATGA 444 0.3671 MEKYEYFLKILIDFKENRIGRNDVIEAAKDLFKGHDHLLLGLNNFLPRGYEIQLPLVNEESSEPVLGIQDPTDFKNKFKARFEENSHIYESFLDIIKKLEAGEKSTTEAQEEIDALLEGHEDLLHELVHFLPGASGSASTEVYDSPS 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0407 147 SUPERFAMILY PAH2 domain 2 50 IPR036600 GO:0006355
Lal14g0407 147 SUPERFAMILY PAH2 domain 67 132 IPR036600 GO:0006355
Lal14g0407 147 Pfam Paired amphipathic helix repeat 87 131 IPR003822 GO:0006355
Lal14g0407 147 Pfam Paired amphipathic helix repeat 2 46 IPR003822 GO:0006355
Lal14g0407 147 PANTHER SIN3B-RELATED 2 134 IPR039774 GO:0003714
Lal14g0407 147 Gene3D Paired amphipathic helix 1 47 IPR036600 GO:0006355
Lal14g0407 147 Gene3D Paired amphipathic helix 70 132 IPR036600 GO:0006355
Lal14g0407 147 ProSiteProfiles PAH domain profile. 64 134 IPR003822 GO:0006355
Lal14g0407 147 ProSiteProfiles PAH domain profile. 1 49 IPR003822 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0407 Lal-Chr14 5770937 5771958 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g0407 2 83 WRKY Transcription Factor Family AT4G12020 39.759 2.18e-10 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lal14g0407 PAH 3e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0407 K11644 - lang:109341642 203.371