LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal14g0406	ATGGAAAAGTATGAATACTTTTTGAAAATATTGATAGACTTCAAAGAAAACAGAATTGGTAGAAATGATGTTATAGAAGCTGCCAAGGATTTATTCAAAGGACATGATCATCTACTGTTGGGGTTAAACAACTTTCTTCCAAGGGTTATGAAATCCAACTTCCAATCATCTGAGCCAGTTCTTGGAATTCAAGATCCAACCGATTTCAAGAATAAGTTTAAGGCTCGCTTTGAAGAAAATTCTCATATATATGAGTCTTTTCTAGATATTATCAAAAAATTGGAAGCCGGGGAAAAATCTACAACCGAGGCTCAAGAAGAGATTGATGCACTATTGGAGGGCCATGAAGATCTCCTTCATGAGTTAGTTCACTTTCTTCCTGGTGCTTCAGGATCAGCCTCTACCGAAGTATATGATAGCCCTTCATGA	429	0.3683	MEKYEYFLKILIDFKENRIGRNDVIEAAKDLFKGHDHLLLGLNNFLPRVMKSNFQSSEPVLGIQDPTDFKNKFKARFEENSHIYESFLDIIKKLEAGEKSTTEAQEEIDALLEGHEDLLHELVHFLPGASGSASTEVYDSPS	142

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal14g0406	142	Pfam	Paired amphipathic helix repeat	2	46	IPR003822	GO:0006355
	Lal14g0406	142	Pfam	Paired amphipathic helix repeat	82	126	IPR003822	GO:0006355
	Lal14g0406	142	ProSiteProfiles	PAH domain profile.	1	49	IPR003822	GO:0006355
	Lal14g0406	142	Gene3D	Paired amphipathic helix	65	127	IPR036600	GO:0006355
	Lal14g0406	142	Gene3D	Paired amphipathic helix	1	47	IPR036600	GO:0006355
	Lal14g0406	142	SUPERFAMILY	PAH2 domain	62	127	IPR036600	GO:0006355
	Lal14g0406	142	ProSiteProfiles	PAH domain profile.	50	129	IPR003822	GO:0006355
	Lal14g0406	142	PANTHER	SIN3B-RELATED	2	129	IPR039774	GO:0003714
	Lal14g0406	142	SUPERFAMILY	PAH2 domain	2	48	IPR036600	GO:0006355

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal14g0406	Lal-Chr14	5759662	5760677	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lal14g0406	2	78	WRKY Transcription Factor Family	AT4G12020	37.662	2.54e-09	52.8

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TR	Others	Lal14g0406		PAH	2.8e-11	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal14g0406	K11644		-	lang:109341642	176.792