Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0404 ATGGATAGCGAAGGAAGCAGAAGATTAACTACAAATGATGCTTTATTATATCTTAAAGAAATAAAGACCGTATTTACTGAAGACATGGAAAAGTATGAATACTTTTTGAAAATATTGATAGACTTCAAAGAAAACAGAATTGGTAGAAATGATGTTATAGAAGCTGCCAAGGATTTATTCAAAGGACATGATCATCTACTGTTGGGGTTAAACAACTTTCTTCCAAGGGGTTATGAAATCCAACTTCCGTTAGTAAATGAAGAATCATCTGAGCCAGTTCTTGGAATTCAAGATCCAACCGATTTCAAGAATAAGTTTAAGGCTCGCTTTGAAGAAAATTCTCATGTATATGAGTCTTTTCTAGATATTATCAAAAAATTGGAAGCCGGGGAAAAATCTACAACCGAGGCTCAAGAAGAG 420 0.3381 MDSEGSRRLTTNDALLYLKEIKTVFTEDMEKYEYFLKILIDFKENRIGRNDVIEAAKDLFKGHDHLLLGLNNFLPRGYEIQLPLVNEESSEPVLGIQDPTDFKNKFKARFEENSHVYESFLDIIKKLEAGEKSTTEAQEE 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0404 140 SUPERFAMILY PAH2 domain 7 76 IPR036600 GO:0006355
Lal14g0404 140 Gene3D Paired amphipathic helix 13 75 IPR036600 GO:0006355
Lal14g0404 140 PANTHER SIN3B-RELATED 5 137 IPR039774 GO:0003714
Lal14g0404 140 ProSiteProfiles PAH domain profile. 7 77 IPR003822 GO:0006355
Lal14g0404 140 Gene3D Paired amphipathic helix 89 140 IPR036600 GO:0006355
Lal14g0404 140 Pfam Paired amphipathic helix repeat 30 74 IPR003822 GO:0006355
Lal14g0404 140 SUPERFAMILY PAH2 domain 95 138 IPR036600 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0404 Lal-Chr14 5736501 5737367 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g0404 9 111 WRKY Transcription Factor Family AT4G12020 42.718 2.76e-16 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lal14g0404 PAH 2.7e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0404 K11644 - lang:109341642 196.052