Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0388 ATGCCCTTAGGCACGACCATATATAACATAGAAATCACACTCAGAAAGGGTGGACAATTAGCTAGAGCAGCAGGTGTTGTAGCGAAACTGATTGCAAAATATGGGAAATCGGCCACATTAAAATTACCTTCTGGGGAGGTCCTCGGGCAAGTGGGGAATGTTGGGATAAACCAAAAAAGTTTGGGTAGAGCCGAAGCTAAATGTTGGCTAGGTAAACGTCCTGTAGTAAGAGGAGTAGTTATGAATCTAGTAGACCATCCCCATGGGGGTGGTGAAGGGAGGGCCCCAATCGGTTGA 297 0.4646 MPLGTTIYNIEITLRKGGQLARAAGVVAKLIAKYGKSATLKLPSGEVLGQVGNVGINQKSLGRAEAKCWLGKRPVVRGVVMNLVDHPHGGGEGRAPIG 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0388 98 Gene3D Ribosomal protein L2, domain 3 53 98 IPR014726 -
Lal14g0388 98 PANTHER - 1 98 - -
Lal14g0388 98 SUPERFAMILY Translation proteins SH3-like domain 1 97 IPR008991 -
Lal14g0388 98 PANTHER RIBOSOMAL PROTEIN L2 1 98 IPR002171 GO:0003735|GO:0005840|GO:0006412
Lal14g0388 98 Pfam Ribosomal Proteins L2, C-terminal domain 1 96 IPR022669 GO:0003735|GO:0005840|GO:0006412
Lal14g0388 98 Gene3D - 1 52 IPR014722 -
Lal14g0388 98 SMART Ribosomal_L2_C_2 1 97 IPR022669 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0388 Lal-Chr14 5392472 5392797 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g0388 1 92 Cytoplasmic Ribosomal Protein Gene Family AT3G51190 39.823 3.07e-13 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0388 K02886 - ghi:121226617 172.555