Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0300 ATGGATGGTGAAGGAAGCAAAAGAGTAACTACAAAGGATGCTTTATTATATATTAAAGAAATAAAGACTGTATTTACAGAAGACATGGAAAAGTATGAACACTTTTTGAAAATATTGAGAGACTTCAAAGAACACAGAATTGGTAGAAATGATGTTATAGCAGCTACCAGTGATTTATTCAAAGGACATGATCATCTACTGTTGGGGTTAAACAACTTCCTTCCAAGGGGTTATGAAATCCAACTTCCATTAGTAAATGAAGAATCATCTGAGCCAGTTTTTGAAATTGAAGTTCCAACAGATTTCAAGAACAAAGTTAAGGCTCGCTTTGAAGAAAATTCTGATAAATATGAGTCATTCCTAGACAAAATAAAACAATTAGAAGCCGGGAAAAAGTCTACAACCGAAACTCTTGAAGAGATTGCTGCAGTGTTGGAGGGCCATGAAGATCTCTTTCAGGAGTTAATTCAATTTATTCCTGGTGCTTCAGGATCAGCCTCTACCTAG 507 0.3531 MDGEGSKRVTTKDALLYIKEIKTVFTEDMEKYEHFLKILRDFKEHRIGRNDVIAATSDLFKGHDHLLLGLNNFLPRGYEIQLPLVNEESSEPVFEIEVPTDFKNKVKARFEENSDKYESFLDKIKQLEAGKKSTTETLEEIAAVLEGHEDLFQELIQFIPGASGSAST 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0300 168 ProSiteProfiles PAH domain profile. 7 77 IPR003822 GO:0006355
Lal14g0300 168 SUPERFAMILY PAH2 domain 99 160 IPR036600 GO:0006355
Lal14g0300 168 Gene3D Paired amphipathic helix 100 160 IPR036600 GO:0006355
Lal14g0300 168 Gene3D Paired amphipathic helix 13 75 IPR036600 GO:0006355
Lal14g0300 168 PANTHER SIN3B-RELATED 6 161 IPR039774 GO:0003714
Lal14g0300 168 SUPERFAMILY PAH2 domain 7 78 IPR036600 GO:0006355
Lal14g0300 168 Pfam Paired amphipathic helix repeat 115 158 IPR003822 GO:0006355
Lal14g0300 168 Pfam Paired amphipathic helix repeat 30 74 IPR003822 GO:0006355
Lal14g0300 168 ProSiteProfiles PAH domain profile. 90 162 IPR003822 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0300 Lal-Chr14 3663194 3664207 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g0300 1 111 WRKY Transcription Factor Family AT4G12020 44.248 2.56e-18 79.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lal14g0300 PAH 8.6e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0300 K11644 - lang:109341642 229.18