Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0250 ATGATAGTTGCAATGGATTTGAATGCTTCGCCGGTCCCGGATGAAGAGGAAGACACTTTTGAGGGACATGCTGTCAGAGAGTTTAGCGCATCAGAAGAACGCGTGGAAAGTGCTGTTGATATAGCACGCCGGGAGCGTGAAGAAAGAAAGAGACGATTAAAGAGAGAACGTCCAGATGATAGGTCTGTGCATGTATCACAGTCACCTGGATATGATCAGCTGGTCCATACTAAGACCCTTAAATCACATGAAAGAAGCAGGCTTCCTCCAGGGTGGTTGGAATGTCCTTCATTTGGGCAGGAAATTTTTTGCATGGTACCTTCCAAGGTTCCACTTGGTGAATCATTTAATGACTGCATTGCTCCTGGTAAAAGATACTCATTTAAACAAGTGATACATCAACAGAGAGTTTTAGGAAGAAAACTTGGTCTCGTGATTGATTTGACAAATACTTCTCGATACTATCCTGTGTCAGATTTAAAGAAAGAGGGTATCAAACATGTTAAGATTCAATGCAAGGGGCGTGATTCTGTACCTGATAATTTAGCTGTGAATCAGTTTGTGTATGAGGTTACTCAATTTCTAGTACGTCAAAAACACTCGAAGAAGTATATTCTTGTTCATTGTACACATGGGCACAATCGTACTGGATATATGATCATCCATTATCTGATGCGTTCTATGTCATTGTCTGTTACTCAGGCAATAAAAATGTTTTCTGATGCGCGCCCTCCAGGAATCTACAAACCCGATTACATTGATGGATTGTACACATTTTATCATGAAAAGAAGCCTGAAATGGTAGTTTGTCCTCCGACTCCGGAGTGGAAAAGATCTTCTGAACTTGACCTCAATGGTGAAGCAGTTCCAGATGATGATGATGATGGAATACCAGATCCTCATATGCATGAGAACCATGAGACTGACGCACGAATGACAAATGATGATGTTTTGGGAGATGAAATATCTAATGATCAGCAAGAGGCATTCCGACAGTTCTGTTATCAATCACTTAAATTGAGTGTTGGGGTCAGAGGACACGCACAATTTCCAGGTTCACATCCCGTTTCTCTTAACAGGGATAATTTGCAGTTGTTACGACAGCGTTATTATTATGCAACATGGAAAGCTGATGGTACACGATATATGATGCTTATAACTATGGATGGATGCTACTTAATTGACAGAAATTTCGTTTTTCGAAGGGTCCAAATGAGGTTTCCTTGCAGGAGTGCAAATGATGGTTTGGGCGAGAAGACCCACCACTTCACATTACTTGATGGTGAGATGGTCATTGATACATTGCCTGATTCAAATAAGCAGGAGAGAAGATACCTTATATATGATATGATGGCAATCAACCAAGTATCAATAATAGAGCGACCCTTCTATGAACGATGGAAAATGCTTGAGAAAGAAGTCATTGAACCTAGGAATCATGAACGACAGCATATATACCAGAGCAGAAATCCTTACTATAGATATGATTTGGAACCATTTAGGGTGAGGAGGAAGGATTTCTGGTTGCTCTCTACTGTCAATAAGCTTTTGAAGGAGTTCATTAAAAGACTCTCACATGAGGCAGATGGTCTTATATTTCAGGGTTGGGATGATCCATATGTACCTCGTACTCATGAAGGCCTTTTAAAGTGGAAATATGCAGAGCTGAATTCAGTTGATTTTCTCTTTGAGGTTGATGGTGATCGTCAGCTACTTTATATCTATGATCGAGGAAAAAAGAGACTCATGGAAGGGAATACAGTTGCATTCGGAGATGATTCAGATCCATCATCTTATTCTGGAAAGATCATAGAGTGTTCCCGGAATCCGGAAACACAGGAATGGGTATTCTTGCGAATCAGGACAGATAAATCTACTCCAAATGAGTTTAATACATACAAGAAGGTGATGCGAAGTATAAAAGACAACATCACACAGGATGACTTATTGGATGAAATAAACGAGATAATTCGCCTTCCCATGTATGCCGACAGGATACAGCATGATAGTAAAGCCAATCAGCTTGCTGCAATGGCGCGACGAAGGTAA 2049 0.4051 MIVAMDLNASPVPDEEEDTFEGHAVREFSASEERVESAVDIARREREERKRRLKRERPDDRSVHVSQSPGYDQLVHTKTLKSHERSRLPPGWLECPSFGQEIFCMVPSKVPLGESFNDCIAPGKRYSFKQVIHQQRVLGRKLGLVIDLTNTSRYYPVSDLKKEGIKHVKIQCKGRDSVPDNLAVNQFVYEVTQFLVRQKHSKKYILVHCTHGHNRTGYMIIHYLMRSMSLSVTQAIKMFSDARPPGIYKPDYIDGLYTFYHEKKPEMVVCPPTPEWKRSSELDLNGEAVPDDDDDGIPDPHMHENHETDARMTNDDVLGDEISNDQQEAFRQFCYQSLKLSVGVRGHAQFPGSHPVSLNRDNLQLLRQRYYYATWKADGTRYMMLITMDGCYLIDRNFVFRRVQMRFPCRSANDGLGEKTHHFTLLDGEMVIDTLPDSNKQERRYLIYDMMAINQVSIIERPFYERWKMLEKEVIEPRNHERQHIYQSRNPYYRYDLEPFRVRRKDFWLLSTVNKLLKEFIKRLSHEADGLIFQGWDDPYVPRTHEGLLKWKYAELNSVDFLFEVDGDRQLLYIYDRGKKRLMEGNTVAFGDDSDPSSYSGKIIECSRNPETQEWVFLRIRTDKSTPNEFNTYKKVMRSIKDNITQDDLLDEINEIIRLPMYADRIQHDSKANQLAAMARRR 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0250 682 ProSiteProfiles ATP-dependent DNA ligase family profile. 445 580 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Lal14g0250 682 ProSitePatterns Tyrosine specific protein phosphatases active site. 207 217 IPR016130 GO:0016311|GO:0016791
Lal14g0250 682 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 185 254 IPR000387 GO:0016311|GO:0016791
Lal14g0250 682 Pfam Dual specificity phosphatase, catalytic domain 140 259 IPR000340 GO:0008138|GO:0016311
Lal14g0250 682 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 323 553 - -
Lal14g0250 682 MobiDBLite consensus disorder prediction 16 63 - -
Lal14g0250 682 CDD Adenylation_mRNA_capping 350 553 IPR001339 GO:0004484|GO:0005524|GO:0006370
Lal14g0250 682 Pfam mRNA capping enzyme, catalytic domain 354 552 IPR001339 GO:0004484|GO:0005524|GO:0006370
Lal14g0250 682 Gene3D DNA ligase/mRNA capping enzyme 313 552 - -
Lal14g0250 682 MobiDBLite consensus disorder prediction 295 311 - -
Lal14g0250 682 SMART dsp_5 101 262 IPR020422 GO:0006470|GO:0008138
Lal14g0250 682 PANTHER MRNA-CAPPING ENZYME 3 682 - -
Lal14g0250 682 SUPERFAMILY Nucleic acid-binding proteins 555 667 IPR012340 -
Lal14g0250 682 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 88 277 IPR029021 -
Lal14g0250 682 Gene3D - 589 659 IPR012340 -
Lal14g0250 682 PIRSF mRNA_capping_HCE 74 682 IPR017074 GO:0004484|GO:0006370|GO:0140818
Lal14g0250 682 MobiDBLite consensus disorder prediction 285 311 - -
Lal14g0250 682 MobiDBLite consensus disorder prediction 1 70 - -
Lal14g0250 682 PANTHER MRNA (GUANINE-N(7)-)-METHYLTRANSFERASE-RELATED 3 682 - -
Lal14g0250 682 Pfam mRNA capping enzyme, C-terminal domain 569 650 IPR013846 -
Lal14g0250 682 Gene3D Protein tyrosine phosphatase superfamily 84 296 IPR029021 -
Lal14g0250 682 CDD RNA_5'-triphosphatase 91 257 - -
Lal14g0250 682 ProSiteProfiles Dual specificity protein phosphatase domain profile. 115 266 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0250 Lal-Chr14 2863980 2878845 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g0250 1 682 Protein tyrosine phosphatase (PTP) family AT3G09100 67.587 0.0 936
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0250 K13917 - gmx:100776633 1194.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g0250 14 2863980 2878845 Lal7g0115 7 1231216 1253156 LSH