Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0196 ATGAAATCAGTAGGAATGGAAAAAGATGGTGGGGTTGATGATGTTAAGATACCATTGTTGGAGACTGAAGAAGAAGAAGAATATGTGAGAGATAGAAGAGTTTTGTTTCAAATAAGTGATATAAAGTGTGCTTCATGTGTAAACTCTGTTGAATCTGCAGTTAGAAACATTAATGGGGTCAAAAGTGTTATGGTGTCACCACTTGATGGTAGAGCAGCAATCAAATATGCCCCGAAGTTTGTAACTGCGAAAAAAATAAAGGAAACCATAGAAGATGCTGGCTTTAGAGTTGACAATGTCCAAGAGCAAAACATATCGGTATGCCGAGTCAGGATTAAGGGAATGACATGCACAAGCTGCTCTGAGTCTATTGAGAATGCACTTCAAATGGTTGATGGAGTGAAAAAGGCAATAGTTGGTCAAGCTTTAGAAGAGGCAAAAGTGCACTTTGATTCTAACATCACAAATGCTGACAAGATAATTGAAGCTATAGAAGGTGGTGGTTATGGAGCAGATCTTATTAGCTCAGGGAATGATGTGAACAAAGTGCATCTAAAAGTTGAAGGGGTTGATTCTGCAAAAGACGTTGATGCAATAATGTCTTGTATTGAGTTAGCGGTAGGTGTGAATCATGTTGAAATGGATTTGACAAACCATACAGTTACAGTTGGCTATGATCCAGACTTTACAGGTCCAAGAACTCTCATTCATTGCATTCAAGCAGCTAGCTGTGGCACCAAGATATATCAAGCAAGCTTATACTCTCCTCCAGGCCAAATAGGAAGGGATAAGGTGAATGAAATTTGTATGTATAGGAACCAGTTTTTGTTCAGCTGCTTATTTTCTGTTCCTGTATTAGTATTTGCCATGGTGCTTCCTATGTTTCCTTCATGTGACAACTGGTTAAACTATAAGATCCACAATATGCTCACTCTTGGGTTGCTTTTAAGATGGGTCCTTAGCACACCTGTCCAGTTCATAGTTGGGAAAAGGTTTTATATTGGTTCATATCATGCCCTGAGGCGAAGATCTGCTAACATGGATGTTCTGGTTGCATTAGGGACTAATGCTGCTTATTTTTATTCGATATATGTCTTGATAAAAGCATCAACTTCAGATACATTTCAAGGACAGGATTTCTTTGAGACCAGTTCCATGTTGATATCCTTTATTCTATTAGGAAAATATCTGGAGATTATGGCGAAAGGGAAAACGTCAGATGCTTTAGCAAAGCTGACAAAACTTGTTCCTGATAACGCTTATTTGATAGAAATCGATACTGGTGGAAACATCATCGCAGAGACAGAAATTGACACTCAACTTATACAAAAGAATGACATAATTAAGATTGTTCCTGGTGCCAAAATTCCAGTTGATGGTATTATTATAAAAGGACAGAGCTATGCTAATGAAAGCATGATCACTGGGGAGGCAAGACCTGTTGACAAAAGTCCAGGAGACAAGGTTATCAGTGGAACCATCAATGAGAATGGCTGCTTACATGTTAAAGCTACACATGTTGGATCAGACACTGCACTTTCTCAAATTGTTCAACTTGTAGAAGCTGCTCAACTTGCTAAAGCCCCAGTTCAAAAACTTGCTGATGACATTTCTAGGGTTTTTGTTCCAATAGTGGTTGTAGCAGCACTCATAACTTGGCTGGGGTGGTACATTCCTGGGAAAGCTGGTATTTACCCTAAGCATTTAGGACCAAAAGCAGTGGATCCATTTGAGCTTGCTTTGCAGTTTGCTATTTCTGTGCTAGTTGTTGCTTGCCCATGTGCTCTGGGTCTAGCAACACCGACTGCTGTCATGGTTGCTTCGGGCATGGGTGCTTCTCTAGGTGTACTCATTAAGGGCGGAGATGCACTGGAAAAGGCACATAAGGTAAAAATTGTTGTGTTTGATAAGACTGGGACACTAACAGTCGGGAAGCCAGTGGTAGTTAGTGCAGTTCTGTTTTCTAAATTTTCTATGGAGGAGTTGTGTGACATGACAGTTTCTGTGGAGGCAAGTAGTGAACACCCAATAGCAAAATCTGTTGTGGCATATGCAAAGAGGCTGCGCCAGAAATTTGGTTCCCGCGCTGAGGATGTCCCAGATGTGAAGGACTTTGAGGTACACGTAGGAGCTGGGGTATGCGGAAAAGTTGGCAGAAGAACAGTTTTAGTTGGAAACAAGAGACTCATGCATGCTTGTAATGTTCCAATATGTTCAGAGGTTGAGAGGTACATCTTTGAAAATGAAATTCAGGCTAGAACTTGTGTTTTAGTTTCAATTGATGGAAAAATTGCTGGAGCATTCTCTGTAAGTGATCCTGTAAAGCCCGAGGCTAAGCGTGTCATATCTTTTCTCCACTCTATGGGCATCGCAAGCATCATTGTGACTGGTGATAACTTTGCTACTGCAATTGCTATTGCTAGAGAAGTTGGTATCGATGAAGTCTTAGCTGAGACGAATCCACTGGGAAAAGTTGATAAAGTGAAAGAATTGCAGATGAAAGGAATGACCGTGGCGATGGTTGGTGATGGAATAAATGATTCGCCGGCCTTAGTTGCAGCTGATGTTGGTATGGCTATTGGAGCTGGAACTGATATAGCTATAGAAGCAGCTGATATTGTTCTTGTCAAAAGCAGCTTGGAAGATGTAGTTACAGCCATAGATCTATCTCGAAAAAGTATGTCGCGTATTCGGCTCAATTACATCTGGGCTCTTGGCTACAACATTCTAGGTATGCCAATTGCTGCAGGGGTTTTGTACCCTTTTACAGGTATCAGATTACCTCCATGGCTTGCCGGTGCTTGCATGGCTGCATCTTCTCTTAGTGTGGTTTCTTCCTCTCTTTTGCTGCAGTTTTATAAAAAACCATTGCATTTAGAATAA 2883 0.4086 MKSVGMEKDGGVDDVKIPLLETEEEEEYVRDRRVLFQISDIKCASCVNSVESAVRNINGVKSVMVSPLDGRAAIKYAPKFVTAKKIKETIEDAGFRVDNVQEQNISVCRVRIKGMTCTSCSESIENALQMVDGVKKAIVGQALEEAKVHFDSNITNADKIIEAIEGGGYGADLISSGNDVNKVHLKVEGVDSAKDVDAIMSCIELAVGVNHVEMDLTNHTVTVGYDPDFTGPRTLIHCIQAASCGTKIYQASLYSPPGQIGRDKVNEICMYRNQFLFSCLFSVPVLVFAMVLPMFPSCDNWLNYKIHNMLTLGLLLRWVLSTPVQFIVGKRFYIGSYHALRRRSANMDVLVALGTNAAYFYSIYVLIKASTSDTFQGQDFFETSSMLISFILLGKYLEIMAKGKTSDALAKLTKLVPDNAYLIEIDTGGNIIAETEIDTQLIQKNDIIKIVPGAKIPVDGIIIKGQSYANESMITGEARPVDKSPGDKVISGTINENGCLHVKATHVGSDTALSQIVQLVEAAQLAKAPVQKLADDISRVFVPIVVVAALITWLGWYIPGKAGIYPKHLGPKAVDPFELALQFAISVLVVACPCALGLATPTAVMVASGMGASLGVLIKGGDALEKAHKVKIVVFDKTGTLTVGKPVVVSAVLFSKFSMEELCDMTVSVEASSEHPIAKSVVAYAKRLRQKFGSRAEDVPDVKDFEVHVGAGVCGKVGRRTVLVGNKRLMHACNVPICSEVERYIFENEIQARTCVLVSIDGKIAGAFSVSDPVKPEAKRVISFLHSMGIASIIVTGDNFATAIAIAREVGIDEVLAETNPLGKVDKVKELQMKGMTVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLVKSSLEDVVTAIDLSRKSMSRIRLNYIWALGYNILGMPIAAGVLYPFTGIRLPPWLAGACMAASSLSVVSSSLLLQFYKKPLHLE 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0196 960 SUPERFAMILY HAD-like 632 947 IPR036412 -
Lal14g0196 960 CDD P-type_ATPase_Cu-like 275 937 - -
Lal14g0196 960 Pfam E1-E2 ATPase 433 610 - -
Lal14g0196 960 PRINTS H+-transporting ATPase (proton pump) signature 841 857 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal14g0196 960 PRINTS H+-transporting ATPase (proton pump) signature 872 897 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal14g0196 960 Pfam haloacid dehalogenase-like hydrolase 630 855 - -
Lal14g0196 960 ProSiteProfiles Heavy-metal-associated domain profile. 33 99 IPR006121 GO:0046872
Lal14g0196 960 Gene3D - 719 772 IPR023299 GO:0000166
Lal14g0196 960 Gene3D - 641 718 IPR023299 GO:0000166
Lal14g0196 960 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 347 950 IPR027256 GO:0006812|GO:0016021|GO:0019829
Lal14g0196 960 Gene3D - 106 177 - -
Lal14g0196 960 CDD HMA 36 97 IPR006121 GO:0046872
Lal14g0196 960 PANTHER ATP7, ISOFORM B 22 958 - -
Lal14g0196 960 ProSiteProfiles Heavy-metal-associated domain profile. 107 173 IPR006121 GO:0046872
Lal14g0196 960 PRINTS P-type cation-transporting ATPase superfamily signature 470 484 - -
Lal14g0196 960 PRINTS P-type cation-transporting ATPase superfamily signature 634 648 - -
Lal14g0196 960 PRINTS P-type cation-transporting ATPase superfamily signature 766 777 - -
Lal14g0196 960 PRINTS P-type cation-transporting ATPase superfamily signature 788 798 - -
Lal14g0196 960 PRINTS P-type cation-transporting ATPase superfamily signature 841 860 - -
Lal14g0196 960 PRINTS P-type cation-transporting ATPase superfamily signature 864 876 - -
Lal14g0196 960 SFLD p-type atpase 616 892 IPR044492 -
Lal14g0196 960 SUPERFAMILY HMA, heavy metal-associated domain 103 177 IPR036163 GO:0046872
Lal14g0196 960 CDD HMA 110 171 IPR006121 GO:0046872
Lal14g0196 960 Gene3D - 30 103 - -
Lal14g0196 960 SUPERFAMILY HMA, heavy metal-associated domain 33 101 IPR036163 GO:0046872
Lal14g0196 960 Pfam Heavy-metal-associated domain 109 169 IPR006121 GO:0046872
Lal14g0196 960 Pfam Heavy-metal-associated domain 36 95 IPR006121 GO:0046872
Lal14g0196 960 SUPERFAMILY Calcium ATPase, transmembrane domain M 382 626 IPR023298 -
Lal14g0196 960 Gene3D - 178 250 - -
Lal14g0196 960 SFLD Haloacid Dehalogenase 616 892 - -
Lal14g0196 960 TIGRFAM TIGR00003: copper ion binding protein 110 170 IPR006122 GO:0005507
Lal14g0196 960 TIGRFAM TIGR00003: copper ion binding protein 35 97 IPR006122 GO:0005507
Lal14g0196 960 SUPERFAMILY HMA, heavy metal-associated domain 176 249 IPR036163 GO:0046872
Lal14g0196 960 PANTHER COPPER-TRANSPORTING ATPASE HMA5-RELATED 22 958 - -
Lal14g0196 960 Gene3D - 402 524 - -
Lal14g0196 960 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 387 918 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lal14g0196 960 Gene3D - 601 898 IPR023214 -
Lal14g0196 960 ProSiteProfiles Heavy-metal-associated domain profile. 182 248 IPR006121 GO:0046872
Lal14g0196 960 SUPERFAMILY Calcium ATPase, transduction domain A 435 520 IPR008250 -
Lal14g0196 960 ProSitePatterns E1-E2 ATPases phosphorylation site. 636 642 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0196 Lal-Chr14 2219731 2235336 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g0196 33 960 Primary Pumps ATPases AT1G63440 56.471 0.0 1048
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0196 K17686 - gmx:100793894 1554.27