Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0190 ATGGAAAACCATTTCTTTCAAAATTCCATGCACTTTGAACCTTCACCTCATTCTTCAATACCAATGGAAACTCATTCTTCTTCTCATCAAAACCAAGATTGCTTTTTCACTCATCCCAACATCTCCAATGACAATATAGTAATAAGAGAGTTCATTGGAAAGTTAGGAACTTCTTACATCAATGGCAATAATAATACTATTAACAACACCCCTTTGAGCTTGAATACTAGTGTGGAAGGATTCACAGAAGATCGAGGCTTCGCCGCGAGGGCGGCGAAGCTTTCTTGCTTTGGAAGCAAGAGTTTCAATGCCAGCAGAAGCAGCAGAAGAAGTAGCCACTTGGTGATGAACAATGATGATGAATTAGCACAAGGATCTTATCAAGTAATGGAAAATGTGAAGATTTTGAGTAGAGTCTCAAGTAGCCCATCATTGAAAACAAAAATGATGAATTCTCAAGATGAATCTATGATCTTGGATCAAAATCTTAATGGAGATATTGGGGTCAAATCTTCATCTGATATGATGAATTCTAGGAAAAGAAAAGCTTCTGCTAAAGGAAAAGCTAAAGAAACTTCGATCTCTAATAAGGGCGTTGAAGGTAGCGAAGACTTAAATGCGAAGCGGAACAAGTCAAATGAAGGCGACGGAAATGAAAATGGTGTTGTGAAGGTAGAGGAAGAAATCAAAGGAGATAGTAGTAATTCCAAACCTATTGAGCCTATGAAAGATTACATTCATGTTAGAGCAAGAAGGGGTCAAGCTACTGATAGTCATAGTCTTGCAGAACGTGCACGTAGGGAGAAAATTGGTGAGAGGATGAAGCTTCTACAAGATCTTGTACCAGGTTGCAATAAGGTGATTGGTAAAGCACTTATGCTTGATGAAATTATAAACTATGTACAATCATTGCAGCATCAAGTTGAGTTCTTGTCAATGAAATTGTCTTCTGTTAATACCAAGATGGATTATAATATTGAGAATCTTATCTCAAAAGATATATTTCAATCAAATAATTCTTTGGCGAACCCAATATTCCAATTAGATTCTTCAGCACAAGCCTTTTATGTGAACCAGACCCAGCAAGATTATAACATTCCTAATGGAAATGTGACACATAATTCAGTGGAAACATTAGATACTACTTTATGTCACATTAATGGATTTAATGAAAGTGATTCTCAGTATCCATTAACATTTTGTGAGGATGATTTGAACACCATTGTTGAGATGGGATTTGGACAAATTGCAAACATCAAAACACCAAGTTTCAATGGTTCAAATCAAGTATCAAATATGAAACTTGAGCTATGA 1314 0.3607 MENHFFQNSMHFEPSPHSSIPMETHSSSHQNQDCFFTHPNISNDNIVIREFIGKLGTSYINGNNNTINNTPLSLNTSVEGFTEDRGFAARAAKLSCFGSKSFNASRSSRRSSHLVMNNDDELAQGSYQVMENVKILSRVSSSPSLKTKMMNSQDESMILDQNLNGDIGVKSSSDMMNSRKRKASAKGKAKETSISNKGVEGSEDLNAKRNKSNEGDGNENGVVKVEEEIKGDSSNSKPIEPMKDYIHVRARRGQATDSHSLAERARREKIGERMKLLQDLVPGCNKVIGKALMLDEIINYVQSLQHQVEFLSMKLSSVNTKMDYNIENLISKDIFQSNNSLANPIFQLDSSAQAFYVNQTQQDYNIPNGNVTHNSVETLDTTLCHINGFNESDSQYPLTFCEDDLNTIVEMGFGQIANIKTPSFNGSNQVSNMKLEL 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0190 437 MobiDBLite consensus disorder prediction 168 222 - -
Lal14g0190 437 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 144 430 IPR024097 GO:0006355
Lal14g0190 437 Gene3D - 251 328 IPR036638 GO:0046983
Lal14g0190 437 Pfam Helix-loop-helix DNA-binding domain 258 305 IPR011598 GO:0046983
Lal14g0190 437 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 254 304 IPR011598 GO:0046983
Lal14g0190 437 MobiDBLite consensus disorder prediction 202 222 - -
Lal14g0190 437 PANTHER BHLH TRANSCRIPTION FACTOR 144 430 - -
Lal14g0190 437 CDD bHLH_AtBPE_like 244 329 - -
Lal14g0190 437 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 252 323 IPR036638 GO:0046983
Lal14g0190 437 SMART finulus 260 310 IPR011598 GO:0046983
Lal14g0190 437 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0190 Lal-Chr14 2122638 2125302 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g0190 36 395 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G07340 43.590 7.22e-81 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lal14g0190 HLH 8.6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0190 - - lang:109362001 665.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g1740 2 19755181 19758709 Lal14g0190 14 2122638 2125302 PCT
Lal1g2129 1 23383697 23387283 Lal14g0190 14 2122638 2125302 PCT
Lal14g0190 14 2122638 2125302 Lal2g1740 2 19755181 19758709 PCT
Lal14g0190 14 2122638 2125302 Lal1g2129 1 23383697 23387283 PCT