Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0108 ATGGCTACTAAAATATCATGTGATTTTTCTTCTTTAGAGTCTATTAACCACTACTTTGAACATGATTCTCATATTCTCATGACTAGTTCCTATGATCCAATTCAAAGTCCTTCCTCTATGTCTAGTTCTTCCCAAATTGTTAGTAACTTGGACACTACAAATGAAGAGAAAGTGACAAACAAGGCGCGTGTATTGAACGCGGCACCAATATGGAAGCACTACCGCGGTGTGAGGCGAAGGCCATGGGGAAAGTTCGCGGCCGAGATAAGGGATCCAAAGAAGAATGGCGCAAGAGTGTGGCTTGGTACTTATGACACTGAAGAGAAAGCTGGCTTAGCTTATGATAAAGCTGCTTTCAAAATACGTGGTAGAAAGGCGAAGCTCAATTTTCCTCACCTCATTGACTCCAACACAAAGTCCGAGCCAATGAGAGTGATATCCGCTTCTAAGCGGAATTCGCTAGAGCCTTATTCGCCAGCTTTATTTGATGGTTTGGATCAGTTTCAAGGGTCAAAGAGGAGAAAAAACCTAACAAATTTGTTGAATAAGTTAGCCAGAAATAGAAGTCAAGTTGTGCAATTGTTTGAAATGGGCTCAGTGGATAAAGATTTGATGCTGATCAATGGGTGGATCAGTTGA 639 0.4147 MATKISCDFSSLESINHYFEHDSHILMTSSYDPIQSPSSMSSSSQIVSNLDTTNEEKVTNKARVLNAAPIWKHYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYDTEEKAGLAYDKAAFKIRGRKAKLNFPHLIDSNTKSEPMRVISASKRNSLEPYSPALFDGLDQFQGSKRRKNLTNLLNKLARNRSQVVQLFEMGSVDKDLMLINGWIS 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0108 212 SUPERFAMILY DNA-binding domain 73 132 IPR016177 GO:0003677
Lal14g0108 212 Pfam AP2 domain 73 123 IPR001471 GO:0003700|GO:0006355
Lal14g0108 212 PANTHER DNA-BINDING DOMAIN 3 191 IPR044808 GO:0003700|GO:0009873
Lal14g0108 212 ProSiteProfiles AP2/ERF domain profile. 73 131 IPR001471 GO:0003700|GO:0006355
Lal14g0108 212 PANTHER AP2-DOMAIN DNA-BINDING PROTEIN 3 191 - -
Lal14g0108 212 PRINTS Ethylene responsive element binding protein signature 74 85 IPR001471 GO:0003700|GO:0006355
Lal14g0108 212 PRINTS Ethylene responsive element binding protein signature 113 133 IPR001471 GO:0003700|GO:0006355
Lal14g0108 212 SMART rav1_2 73 137 IPR001471 GO:0003700|GO:0006355
Lal14g0108 212 Gene3D AP2/ERF domain 72 132 IPR036955 GO:0003700|GO:0006355
Lal14g0108 212 CDD AP2 72 133 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0108 Lal-Chr14 1093084 1093722 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g0108 73 156 AP2-EREBP Transcription Factor Family AT2G44840 72.619 2.28e-37 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lal14g0108 AP2 1.4e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0108 K09286 - gmx:100805648 193.741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g0108 14 1093084 1093722 Lal14g0108 14 1093084 1093722 ECH