Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0101 ATGTCTGAATATGGCAGTCCAATAATTTTCTCCCACTTGTCCAACTCTTCCGAAGATGAATCCTTTAACCCAAATGACTCTAACCACATTTGTAGTGTTGGTGCAAATGGTTGGTCTAATTGTCCACACCATAGACCACATAAGAGAGCACGAGGTAGACCACCTGGTTCTAAGAACAAGCCAAAACCACCACTTGTCATAACCCGAGACAGTGAAGAATCACTGAAACCAGTGATGATTGAAATCGCCGCCGGCTTAGATGTGGTGAAAGTGGTTGAGAACTTTGCACGCCGCCGTCAAGTTTGCATCTCAGTGATAAGTGGGTCAGGTTCCATTTCCAATGTTACCATTCGAAACCCACTTCCTCATTCTCCTCCTTTCACCATCCATGGTCCTTTCACTTTGTTGGCTCTTACTGGAACCTTTATAAGTGGCCCTTCTTCATCTTTTCCATCAAACCCTAATCATCACTTTCCAACAAATACTAACTCCTTTGGGATTTCCGTCTTAGGGACTAAGGGTGAGATATTTAGTGGGGTTATAGATGGTAACGTTGTGGCTGGATCAAATGTGACTATCATGGCTACAGTATTCAAGAAACCTGAGTTTCACAAGTTTGGAATCAATGGCAATGGTGATGGAGGTGTTGGTGAAAAGGATCATATTCCTAATGGAAATAATTGCCATGGTAACATCAATATTGCTGATTTGTTGAATCCTCAAATTTCTTCCATTGAGAATGATGTGATGCAATGGGGACGTATCTACTCATCAACTTTCTCAAGAAATTACTGA 795 0.4176 MSEYGSPIIFSHLSNSSEDESFNPNDSNHICSVGANGWSNCPHHRPHKRARGRPPGSKNKPKPPLVITRDSEESLKPVMIEIAAGLDVVKVVENFARRRQVCISVISGSGSISNVTIRNPLPHSPPFTIHGPFTLLALTGTFISGPSSSFPSNPNHHFPTNTNSFGISVLGTKGEIFSGVIDGNVVAGSNVTIMATVFKKPEFHKFGINGNGDGGVGEKDHIPNGNNCHGNINIADLLNPQISSIENDVMQWGRIYSSTFSRNY 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0101 264 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 27 253 - -
Lal14g0101 264 Pfam Plants and Prokaryotes Conserved (PCC) domain 76 199 IPR005175 -
Lal14g0101 264 CDD DUF296 76 198 IPR005175 -
Lal14g0101 264 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 27 253 IPR014476 GO:0003680
Lal14g0101 264 MobiDBLite consensus disorder prediction 42 66 - -
Lal14g0101 264 MobiDBLite consensus disorder prediction 42 56 - -
Lal14g0101 264 ProSiteProfiles PPC domain profile profile. 72 224 IPR005175 -
Lal14g0101 264 Gene3D - 75 209 - -
Lal14g0101 264 SUPERFAMILY AF0104/ALDC/Ptd012-like 74 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0101 Lal-Chr14 1058492 1059286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g0101 48 220 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 37.288 5.50e-37 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0101 - - lang:109361805 425.246