Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0095 ATGGCAGACCAAAATCATGTCTTGAATTTGGGTTTGAGTTTGGGTTTTGGAGGAGCTCAAAATGCTAATAATAATAATAATAATAATAATAATGTCATGCATCATTCTCTTCCAAACCATACAGTTTCTTTTAATACATTGTTTCATTTTCCTGATTCAGATCCAAACTCTGAGAACGGAGTTTCGTCCCCGAACAGCACGGTATCGAGTATCAGTGGGAAGCGGAGTGAGAAAGAAGGCAATGGAGAGAGGGCGTCATGTTGTGAAGGTGGTGGCAGTGATGAGGAGGATGGTGAGAATTCGAGGAAGAAGCTGAGGTTGTCAAAGGAACAGGCATTGGTGTTGGAAGAAACATTCAAGGCCCACAATACTCTCAATCCGAAACAAAAGCAAACATTGGCTAATCAGTTGAACCTCAGGCCTAGACAAGTGGAGGTGTGGTTTCAGAATAGAAGAGCAAGGACCAAGTTGAAGCAGACTGAAGTGGATTGTGAGTACTTGAAGAGATGCTGTGAGAATCTAACCGAAGAGAACAAGAGGTTGCAAAAGGAAGTGCAAGAGCTGAGGGCATTGAAATTATCTCCACAGCTCTACATGCACATGAACCCTCCCACCACCCTTACGATGTGCCCTTCGTGTGAGCGTGTTGCTGTCTCATCTACATCATCCTCATCCTCATCAGCCACCATGCCCTCTACCCTGGCTCTGGCTAACCGCAACCCACTGGGCCCTAACATCCAGCGGCCAGTGCCGATCAACCCTTGGGCGGCAATGCAAATCCAACACCGCCCATTTGATGGCCCAACTTCCCGACCATAA 819 0.4652 MADQNHVLNLGLSLGFGGAQNANNNNNNNNNVMHHSLPNHTVSFNTLFHFPDSDPNSENGVSSPNSTVSSISGKRSEKEGNGERASCCEGGGSDEEDGENSRKKLRLSKEQALVLEETFKAHNTLNPKQKQTLANQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTEENKRLQKEVQELRALKLSPQLYMHMNPPTTLTMCPSCERVAVSSTSSSSSSATMPSTLALANRNPLGPNIQRPVPINPWAAMQIQHRPFDGPTSRP 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0095 272 Pfam Homeodomain 102 156 IPR001356 GO:0003677
Lal14g0095 272 ProSitePatterns 'Homeobox' domain signature. 133 156 IPR017970 GO:0000981|GO:0006355
Lal14g0095 272 MobiDBLite consensus disorder prediction 221 242 - -
Lal14g0095 272 ProSiteProfiles 'Homeobox' domain profile. 98 158 IPR001356 GO:0003677
Lal14g0095 272 CDD homeodomain 102 159 IPR001356 GO:0003677
Lal14g0095 272 CDD bZIP 151 190 - -
Lal14g0095 272 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT3 54 261 - -
Lal14g0095 272 MobiDBLite consensus disorder prediction 76 105 - -
Lal14g0095 272 Pfam Homeobox associated leucine zipper 158 192 IPR003106 GO:0006355|GO:0043565
Lal14g0095 272 Gene3D - 90 162 - -
Lal14g0095 272 SUPERFAMILY Homeodomain-like 92 159 IPR009057 -
Lal14g0095 272 Coils Coil 164 194 - -
Lal14g0095 272 MobiDBLite consensus disorder prediction 48 75 - -
Lal14g0095 272 Pfam HD-ZIP protein N terminus 55 79 IPR006712 GO:0005634
Lal14g0095 272 SMART HOX_1 100 162 IPR001356 GO:0003677
Lal14g0095 272 PANTHER - 54 261 - -
Lal14g0095 272 MobiDBLite consensus disorder prediction 48 105 - -
Lal14g0095 272 MobiDBLite consensus disorder prediction 221 240 - -
Lal14g0095 272 SMART halz 158 201 IPR003106 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0095 Lal-Chr14 1011758 1013655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g0095 60 267 Homeobox Transcription Factor Family AT3G60390 67.249 1.34e-92 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lal14g0095 Homeodomain 2.2e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0095 K09338 - gmx:100798480 337.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g0095 14 1011758 1013655 Lal14g0095 14 1011758 1013655 ECH