Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0068 ATGGAGCATGTGGCAAAAGAACTACCTCTTCTGACATTTGTTCAATCTAAGACACAACTAACTACAACTTTAGAAGCATTGTTTGGACTTAGAATGAACATCATCATGGCTTCACTACTCTCTCCAACTACTACTCTCCAACAACATAACCAAATGACAATTTCCTTCTCTCCATTCAAACCAACAACTCCAACTTATTATAATAATGTTTCTTTCAAGAGTAGTACTAGTAATTCTTCAAAGTGTCATGCTTTTTTTGATGACATATCCAATGTTTTGTTGGAGAACAGTGTTATCCAATCAGGAATAGTGCAATTTGAGAGAGTGAGTGAAGACTTATCAGACATGCAGAGATGGAGTTTTGTCATATTTGGTGGGCTTACATGGATTTACTTAACTGCAAGGCCAGGTGTTGTTGTTGGTGCAATTGATGCATACCTTCTTGCTCCTCTTCAACTTGGTTTGGATAATTTATCTGGAAGAAGGAAAAACCTTAAGAGTAGTGATTTTGTTGTTGGGGATAAGCTTGGTGAAGGGTCATATGGTGTTGTTTATTCTGGTGTTTTACTACCAAAGAATGTGAATGTGAATGTGGAAGAGGAGAGGGTGCAGAAGAAGAGGGGAGGAAGGGGCAAGGCAGCAATAACAACACAGTTGGATTTCAAATCTAAGGATAAAGTCATTCTTAAAAAGGTTAAGGTTGGAATTCGAGGAGCTGAAGAATTTGGTGAGTTTGAGGAGTGGTTCAATTACAGGCTCTCCAGAGCCGCGCCCGAAACATGTGCTGACTTCCTTGGAAGTTTTGTAGCTGATCAAACAAATTCACGCTTCACAAAAGGTGGAAAGTGGCTTGTTTGGAAGTTTGAGCATTCAGATGTTCCACAAGTATATATAAAGCTATACAAACTATTCTGCACACTAACTTCAGGGTTGTGCATGTCACAGGGTGATCGCACTCTTGGTGATTACATGAAAGATCGCAGCTTTCCTTCAAACTTGGAATCTGTCATGTTTGGACGTGTCTTGCAAGGTGTAGATTCTTCTAAGCGAAACGCATTGATCATCAAGCAAATAATGCGCCAGATAATTACATCTCTAAAGAAAATTCACAACACAGGAATTGTTCACAGGGATGTGAAGCCAGCTAACTTAGTGGTTACTAGAAGGGGACAGATTAAAATCATTGATTTTGGTGCAGCAACAGACCTGCGAATCGGAAAGAATTATGTTCCCAACCTCGCCCTTTTGGATCCTGACTACTGCCCCCCAGAATTATATGTACTTCCAGAAGAAACACCAAGTCCTCCACCAGCGCCAATTGCAGCTTTACTTTCACCCATTTTATGGCAGTTAAACAGTCCTGATTTGTTTGATATGTATTCGGCCGGCATTGTATTGCTGCAAATGGCGATACCGACCTTAAGGTCTCCTTCTGCTTTGAAGAGCTTCAATTCGGAAATAAAAACATGTGGTTATGATTTGAGAAAATGGAGGGATTATACTCGCCTCAGGCCGGACTTGCAAGTTCTAGATAATGAATCTGGTAGAGGATGGGACTTAGCAACAAAGCTTATCTCTAAGAGAGGTTCCCTAAGAAGAGGACGTTTATCTGCCGCTGCTGCTTTGAGGCATCCTTATTTTCTTCTAGGTCAAGATACACCAAACTCAGCAAAAATAACTGGCATTTCAAGATACTTTTCAGCATCTTCTATGTGTGATTCCATCCAAGACTTTATAAATGGAAGGTGGCTATCAGCAATTGATTGTGAAATCCTTCAACCAGGTTATTAA 1791 0.4026 MEHVAKELPLLTFVQSKTQLTTTLEALFGLRMNIIMASLLSPTTTLQQHNQMTISFSPFKPTTPTYYNNVSFKSSTSNSSKCHAFFDDISNVLLENSVIQSGIVQFERVSEDLSDMQRWSFVIFGGLTWIYLTARPGVVVGAIDAYLLAPLQLGLDNLSGRRKNLKSSDFVVGDKLGEGSYGVVYSGVLLPKNVNVNVEEERVQKKRGGRGKAAITTQLDFKSKDKVILKKVKVGIRGAEEFGEFEEWFNYRLSRAAPETCADFLGSFVADQTNSRFTKGGKWLVWKFEHSDVPQVYIKLYKLFCTLTSGLCMSQGDRTLGDYMKDRSFPSNLESVMFGRVLQGVDSSKRNALIIKQIMRQIITSLKKIHNTGIVHRDVKPANLVVTRRGQIKIIDFGAATDLRIGKNYVPNLALLDPDYCPPELYVLPEETPSPPPAPIAALLSPILWQLNSPDLFDMYSAGIVLLQMAIPTLRSPSALKSFNSEIKTCGYDLRKWRDYTRLRPDLQVLDNESGRGWDLATKLISKRGSLRRGRLSAAAALRHPYFLLGQDTPNSAKITGISRYFSASSMCDSIQDFINGRWLSAIDCEILQPGY 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0068 596 SMART serkin_6 170 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal14g0068 596 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 316 552 IPR044803 GO:0004674|GO:0009579
Lal14g0068 596 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED 22 289 IPR044803 GO:0004674|GO:0009579
Lal14g0068 596 ProSitePatterns Serine/Threonine protein kinases active-site signature. 374 386 IPR008271 GO:0004672|GO:0006468
Lal14g0068 596 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC 22 289 - -
Lal14g0068 596 PANTHER SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC 316 552 - -
Lal14g0068 596 SUPERFAMILY Protein kinase-like (PK-like) 165 548 IPR011009 -
Lal14g0068 596 Gene3D Transferase(Phosphotransferase) domain 1 345 550 - -
Lal14g0068 596 Pfam Protein kinase domain 354 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal14g0068 596 Gene3D Phosphorylase Kinase; domain 1 190 288 - -
Lal14g0068 596 ProSiteProfiles Protein kinase domain profile. 170 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0068 Lal-Chr14 829305 833682 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g0068 361 547 AGC Kinase Gene Family AT3G10540 29.534 2.58e-10 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-4 Lal14g0068 Pkinase 1.3e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0068 - - gmx:100786843 682.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g0068 14 829305 833682 Lal14g0068 14 829305 833682 ECH