Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal14g0012 ATGGGTATTGATTACTATAAAATTCTTAATGTAGATCGAAGTGCTAAAGATAATGATCTCAAGAAAGCATATCGGAAACTTGCCATGAAGTGGCACCCTGATAAGAACCCTAACAATAAGAAAGATGCTGAAGCCAAATTCAAACAAATCTCAGAAGCTTATGATGTATTGAGTGATCCACAAAAGAGACAAGTGTATGATCAGTTTGGTGAGGAAGGGTTGAAGGGACAGGTGCCACCCCAAAGTTCTGGTGGATTTTCCAGTGGAAGTGATGGTGGCGGGCCGACGATGTTCCGGTTTAACCCCAGAAGTGCAGATGATATATTCTCAGAGTTCTTCGGGTTTTCGAGTCCATTTGGTGGAATTGGAGATATGGGTGGTCGTGCTGGTGCATCTGGCTTTCAAAGGGGTATGTTTGGCGATGACCTTTTCTCGTCGTTTAGGAGTGGAGCTGGTGAAGGCTCTGGCAATGTACATGTGCCAAGGAAAAGTGCACCCATAGAGAGAACTTTGCATTGCAATTTGGAGGATTTGTACAAAGGAACCACCAAAAAAATGAAGATTTCCAGGGATGTTACCGATTCCAGTGGGAGGCCCACTACAGTGGAGGAAATTCTAACAATTGAGATTAAGCCAGGTTGGAAGAAAGGAACAAAAATAACTTTTCCAGAGAAGGGAAATGAACAAAGAGGAATTATACCTGCAGATCTCGTTTTTATTATTGATGAGAAGCCTCATAGTGTCTTCAAGAGGGATGGCAATGATCTTGTTGTCACCCAGAAAATATCTCTCGTAGAAGCCCTGACAGGTTACACAACGCAGCTGACAACCCTTGACGGGCGGAATCTTACGGTCTCCATCAACTCCATCGTTAGTCCTTCTTACGAGGAAGTTATTAAAGGAGAGGGTATGCCCATTCCCAAAGAACCTTCCAAACGGGGTAACTTGAGAGTCAAATTCAACATCAAATTCCCCTCTAGGCTTACATCAGAGCAGAAAAGTGGCGTCAAGCGATTATTGACATCTTCTTGA 1032 0.4341 MGIDYYKILNVDRSAKDNDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRQVYDQFGEEGLKGQVPPQSSGGFSSGSDGGGPTMFRFNPRSADDIFSEFFGFSSPFGGIGDMGGRAGASGFQRGMFGDDLFSSFRSGAGEGSGNVHVPRKSAPIERTLHCNLEDLYKGTTKKMKISRDVTDSSGRPTTVEEILTIEIKPGWKKGTKITFPEKGNEQRGIIPADLVFIIDEKPHSVFKRDGNDLVVTQKISLVEALTGYTTQLTTLDGRNLTVSINSIVSPSYEEVIKGEGMPIPKEPSKRGNLRVKFNIKFPSRLTSEQKSGVKRLLTSS 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal14g0012 343 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Lal14g0012 343 SUPERFAMILY Chaperone J-domain 3 100 IPR036869 -
Lal14g0012 343 Gene3D - 246 326 - -
Lal14g0012 343 CDD DnaJ 4 59 IPR001623 -
Lal14g0012 343 PRINTS DnaJ domain signature 6 24 IPR001623 -
Lal14g0012 343 PRINTS DnaJ domain signature 24 39 IPR001623 -
Lal14g0012 343 PRINTS DnaJ domain signature 42 62 IPR001623 -
Lal14g0012 343 PRINTS DnaJ domain signature 62 81 IPR001623 -
Lal14g0012 343 SMART dnaj_3 3 62 IPR001623 -
Lal14g0012 343 CDD DnaJ_C 165 328 - -
Lal14g0012 343 Pfam DnaJ domain 4 67 IPR001623 -
Lal14g0012 343 Pfam DnaJ C terminal domain 167 325 IPR002939 -
Lal14g0012 343 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Lal14g0012 343 Gene3D - 166 244 - -
Lal14g0012 343 MobiDBLite consensus disorder prediction 73 98 - -
Lal14g0012 343 Gene3D DnaJ domain 3 124 IPR036869 -
Lal14g0012 343 SUPERFAMILY HSP40/DnaJ peptide-binding domain 167 246 IPR008971 GO:0006457|GO:0051082
Lal14g0012 343 SUPERFAMILY HSP40/DnaJ peptide-binding domain 248 334 IPR008971 GO:0006457|GO:0051082
Lal14g0012 343 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 342 - -
Lal14g0012 343 PANTHER DNAJ HEAT SHOCK FAMILY PROTEIN 1 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal14g0012 Lal-Chr14 157312 163569 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal14g0012 5 67 C2H2 Transcription Factor Family AT1G74250 34.328 5.27e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal14g0012 K09510 - sind:105174570 567.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal14g0012 14 157312 163569 Lal14g0012 14 157312 163569 ECH