Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1899 ATGGAGCAACCTATCAATGAAGTTGAGTATTTGTCGGAGTTTCAAAATTCACTTTCTGAGTTTCACAGTCAAAATCTTCCTTCAACATCTGGGACTTCCTATCCTTCTTCACGACCTACCTTAAGACCGTCTAGGAATCACACTGCTTCATCAACATCTCACCATAATTATGCATTGAAAATAATTAACAATGTGGAGGAACATGAAGGACTGCCAACAAAATCGGGCATCAAACAACCATTTGATATGGATGGTTTGAAAAATTGTGATTTGAGTGGCGTATTAGAATCCGACAATTGTAGCTTAGTTCCATCGAAGCGAGCTGATGTCAATCACGCTGCTAAGAGTTACTGTCAGTCAGAGGTTACTACTTTTTGTCCAAGTCCATCCCAGAATAGTTTCTACTCAACTACTGTCTATTCGGAAGCCAAAGAAAGCTTCACCAACACCGAAGTCAGCGAGTGGGCTAGTAGTGTTGATAAGTCATGTGATGAGAGTGGAGAAGTTACAAATTACTGTGATTTCAATGAGAGCAGGAAGACCAGCATCTATAGAGCAAGTACGGGAAGTGATGCTACCGACGAGAGCAGCACAAATAGTTTGAGCAGTGCTATGTATAAACCACATAAGGCAAATGATGTAAGATGGGAAGCGATTCAAGCCGTGCGCGCCCGTGATGGTATGCTGGAAATGAGGCATTTCAGGTTGTTGAAGAAATTGGGATGTGGAGATATAGGGAGTGTGTATCTAGCAGAACTGAGTGGCACAAGGACTTCTTTTGCCATGAAAGTGATGAACAAAACGGAGCTGGCGAGTCGCAAGAAGCTTCTGAGGGCTCAGACTGAGAGAGAGATATTGCAATGTTTAGATCATCCTTTTCTGCCGACATTATACACACACTTTGAGACAGAATCATTCTCCTGCTTGGTAATGGAGTTCTGCCCCGGTGGGGACTTGCATGCACTCAGGCAAAGACAACCTGGGAAGTATTTTTCCGAGCATGCTGTCAGGTTTTATGTGGCAGAAGTTCTCCTTGCTTTGGAGTACTTGCACATGCTTGGGATCATTTACAGAGACCTTAAACCGGAGAATGTGTTGGTGAGAGAAGATGGTCATATAATGCTGTCAGATTTTGATCTCTCTTTAAGGTGTACCGTCAGTCCAACTCTAGTAAAGTCATCAAACTCTACCTTGGTGACAAAAAGCTCAGGAGGATACTGCATGGAGCCGACATGTATAACACAGTCGGACTGCATCACACCTTCGTGTTTCACACCACGTTTTCTATCCAAGAAGAAAGAAAAGAAGTTCAAGCTGAGGAACGACACACATCATCAGGTCACCCCTCTGCCCGAGCTTATAGCCGAGCCAACAAATGCGCGATCAATGTCATTTGTCGGCACACATGAGTACTTGGCACCTGAGATTATCAAGGGAGAAGGGCATGGCAGCGCTGTAGACTGGTGGACTTTTGGCATATTCCTATACGAGCTTTTGTTTGGTAGAACACCATTCAAAGGCTCAGTGAATCGAGCGACACTGTTTAATGTGGTTGGGCAGCCGTTAAGGTTTCCAGAATCTCCTACTGTCAGCTTTGCTGCCAGGGACTTGATTAGGGGTTTGCTTGTGAAAGAGCCGCAGCATCGTCTTGCCTATAGACGTGGAGCTACGGAAATTAAACAACATCCATTCTTTCAGAATGTTAATTGGGCACTTATCCGTTGTGCGAATCCGCCAGAGGTGCCAAGACCAGCTGCTATTAGAGCAGCACAGACCGAAAAGGACCCTCCTGGTGTGAAGCCTTCTGGTAATTATTTAGATATTGATTTCTTTTGA 1836 0.4444 MEQPINEVEYLSEFQNSLSEFHSQNLPSTSGTSYPSSRPTLRPSRNHTASSTSHHNYALKIINNVEEHEGLPTKSGIKQPFDMDGLKNCDLSGVLESDNCSLVPSKRADVNHAAKSYCQSEVTTFCPSPSQNSFYSTTVYSEAKESFTNTEVSEWASSVDKSCDESGEVTNYCDFNESRKTSIYRASTGSDATDESSTNSLSSAMYKPHKANDVRWEAIQAVRARDGMLEMRHFRLLKKLGCGDIGSVYLAELSGTRTSFAMKVMNKTELASRKKLLRAQTEREILQCLDHPFLPTLYTHFETESFSCLVMEFCPGGDLHALRQRQPGKYFSEHAVRFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCTVSPTLVKSSNSTLVTKSSGGYCMEPTCITQSDCITPSCFTPRFLSKKKEKKFKLRNDTHHQVTPLPELIAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSVNRATLFNVVGQPLRFPESPTVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQNVNWALIRCANPPEVPRPAAIRAAQTEKDPPGVKPSGNYLDIDFF 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1899 611 MobiDBLite consensus disorder prediction 22 54 - -
Lal13g1899 611 Pfam Protein kinase domain 462 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g1899 611 Pfam Protein kinase domain 235 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g1899 611 ProSiteProfiles Protein kinase domain profile. 234 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g1899 611 ProSitePatterns Serine/Threonine protein kinases active-site signature. 355 367 IPR008271 GO:0004672|GO:0006468
Lal13g1899 611 SMART serkin_6 234 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g1899 611 Gene3D Transferase(Phosphotransferase) domain 1 320 582 - -
Lal13g1899 611 SUPERFAMILY Protein kinase-like (PK-like) 211 588 IPR011009 -
Lal13g1899 611 PANTHER FLIPPASE KINASE 1-RELATED 63 611 - -
Lal13g1899 611 Gene3D Phosphorylase Kinase; domain 1 226 319 - -
Lal13g1899 611 CDD STKc_phototropin_like 232 589 - -
Lal13g1899 611 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL3 63 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1899 Lal-Chr13 18471274 18478736 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1899 137 611 AGC Kinase Gene Family AT5G47750 69.636 0.0 688
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lal13g1899 Pkinase 4.7e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1899 K08286 - gmx:100810909 936.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1899 13 18471274 18478736 Lal13g1899 13 18471274 18478736 ECH