Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1892 ATGTCTCCTTCTTCAATCTCTCATTTTCTGTCTGCAACAACTAACCCCAAAATGTATCACACCTTTCCTCTTCTACATTCTCCCTCAATGCCACGTGTCATCCCCATATCCCACATCCCTCCACTTTCTCATTCTTCTTCTTCTTCTTCTTCTTCTCATTCTTTACTCTTCACTCCTCAAAAGTCTTGTCTTTTCCTCATATCAACTCCAAAAATTGCATCTTTCACACTCCATGCATCTTCTGTTCCTGATTCTAAAAGTGATGAACCCATCAAGCCAACTACTACTCTCATTCACAACTTACACCTTGGAGCCATGTTTGGAACTTGGTACCTCTTGAATATTTACTTCAACATCTTCAATAAACAGGTTCTAAAAGTATATCCATTTCCAGCAACAGTCACAGCATTTCAGTTTGGCTTCGCAACACTTATGATTAACTTAATATGGACTTTAAATCTCCACCCTAGACCAAACATCACTGGCTCACAGCTTGCATCAATCCTTCCTTTGGTTGTGGCTCATACAATGGGGAACCTTTTGACCAATATCAGTCTTGGCAAGGTTGCTATATCATTCACTCACACAATCAAAGCTATGGAACCTTTGTTCACTGTTGTTCTTTCGTCTCTTTTACTCGGTGAGAGACCCACTTTTTGGGTGGTTTCTTCCCTCATACCAATAGTAGGGGGAGTGGTACTGGCATCAATGACTGAAGTCTCTTTCAATTGGGTTGGTTTCAGTACTGCTATGGCATCTAACCTTACTAACCAATCGCGGAATGTATTGAGCAAAAAGCTGATGACCAATGAAAAGGAAACTTTGGACAATATCAATCTCTACTCGGTTATAACCATCATTTCCTTTATCCTGTTGGTCCCGTTTGCTATATTTTTGGAGGGTGTCAAGTTCAGTCCTTCATACCTGCAATCTGCTGCAAGTGAGGGACTGAATGTTAGAGAACTATGTATGAGATCAGTTTTGGCTGCATTCTGCTTTCATGCATACCAGCAGGTATCATATGGAATATTAGAGATGGTGTCACCAGTGAGCCACTCAGTTGGAAATTGTGTGAAGCGTGTGGTTGTCATAGCCTCTTCAGTTATCTTCTTCAAAACTCCTCTCTCACTCATTAACACACTTGGAACTGCTATTGCACTTGTTGGAGTTTTCTTATATTCAAGGGCAAAGCGGATAAAATCAATATTACCAAAGACAAAGACAGCATAA 1230 0.4049 MSPSSISHFLSATTNPKMYHTFPLLHSPSMPRVIPISHIPPLSHSSSSSSSSHSLLFTPQKSCLFLISTPKIASFTLHASSVPDSKSDEPIKPTTTLIHNLHLGAMFGTWYLLNIYFNIFNKQVLKVYPFPATVTAFQFGFATLMINLIWTLNLHPRPNITGSQLASILPLVVAHTMGNLLTNISLGKVAISFTHTIKAMEPLFTVVLSSLLLGERPTFWVVSSLIPIVGGVVLASMTEVSFNWVGFSTAMASNLTNQSRNVLSKKLMTNEKETLDNINLYSVITIISFILLVPFAIFLEGVKFSPSYLQSAASEGLNVRELCMRSVLAAFCFHAYQQVSYGILEMVSPVSHSVGNCVKRVVVIASSVIFFKTPLSLINTLGTAIALVGVFLYSRAKRIKSILPKTKTA 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1892 409 PANTHER SOLUTE CARRIER FAMILY 35 60 401 - -
Lal13g1892 409 Pfam Triose-phosphate Transporter family 102 394 IPR004853 -
Lal13g1892 409 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 101 400 IPR004696 GO:0016021|GO:0022857|GO:0055085
Lal13g1892 409 PANTHER PHOSPHOENOLPYRUVATE/PHOSPHATE TRANSLOCATOR 2, CHLOROPLASTIC 60 401 - -
Lal13g1892 409 SUPERFAMILY Multidrug resistance efflux transporter EmrE 140 238 - -
Lal13g1892 409 SUPERFAMILY Multidrug resistance efflux transporter EmrE 286 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1892 Lal-Chr13 18428382 18431790 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1892 71 400 Antiporters AT3G01550 64.242 6.03e-142 407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1892 13 18428382 18431790 Lal13g1892 13 18428382 18431790 ECH