Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1871 ATGGATATTATTCAGTCTGTATTATTCAAAAACCCAATCAAGGACGAATCATGGAAGACAGTGTTAACTTTAGCATATCAAAGCTTAGGAGTTGTGTATGGAGATTTAAGCACTTCACCACTGTTTGTGTACAAAAGCACTTTTGCTGAGGACATTCAAAATTCAGAAACAAATGAAGAAATCTATGGTGTACTAAGCTTTGTGTTTTGGACAATCACATTGGTTCCACTTTTCAAGTATGTGTTCATTGTTCTAAGAGCTGATGACAATGGAGAAGGAGGAACATTTGCTCTCTATTCATTGCTATGCCGGCATGCCCGGGTTAGCTTATTGCCTGATACTCAGCTTGCAGATGAGGATTTGATTGAATACACCACTGATGAAAGTAGTGTTCCTGCTTATAAGAACAATGTTGGGTTTGGTTTGAAAAAATTGTTGGAGAAACATAGGGTCCTCAAAAAGGTTCTGCTTGTTCTGGCTTTGATTGGGACTTGCATGGTTGTTGGGGATGGTGTGCTATCACCTGCAATTTCTGTTTTCTCTGCTGTGTCTGGTTTAGAGCTTTCCATGTCTAAAGAGCATCACGAAAATATTGAGGTTCCTATTGCTTGTATAATACTGGTGTTTTTGTTTTCCCTTCAACATTATGGAACCCATCGTGTCGGATTTCTATTCGCGCCAATTGTGTTGATCTGGCTGCTAAGCATAAGTGCTATTGGTGTTTATAACATTTTCCATTGGAATCCACATGTTTATGAAGCTCTCTCACCATACTACATGTACAAATTTCTGAAAAAGACTGAAAAGAGAGGGTGGATGTCCTTGGGTGGGATTCTATTGTGTATAACTGGTTCAGAAGCTATGTATGCTGATCTAGGACACTTTTCACAATTGTCAATTCAGATTGCTTTCACCTTTTTGGTATATCCTTCTTTAATCTTAGCATATATGGGACAAGCTGCATATCTTTCCAAGCATCATAGCCATCAAAATGACTGTCAAATCGGCTTCTACGTATCTGTACCTGTACAACTTAGATGGCCTGTTCTTGTGATAGCCATACTCCAAGCCGTGGTTGGAAGTCAAGCTATAATCACAGGAACTTTCTCAATAATCAAACAGTGTTCGTCTTTAGGATGCTTCCCGAAAGTGAAAATTGTTCATACATCATCTAAGATGCATGGCCAGATTTACATTCCAGAGATCAACTGGAGTTTGATGCTACTTTGCTTGTCCTTAACAATTGGATTTAGAGATACTAAACGCATGGGAAATGCTGCAGGCTTGGCTGTCATAACTGTGATGCTAGTGACTACATGCCTAATGTCTCTAGTTATAGTCTTATGCTGGCACAAGAATGTTCTTCTAGCCATTTGCTTTTTACTGTTCTTTGGGTCTATTGAAGCACTCTACTTCTCTGCATCCCTAATCAAGTTCTTTGAGGGAGCCTGGGTCCCCATTGCACTATCATTCTTCTTTCTTGTTATCATGTATGTATGGCACTATGGCACAGTGAAGAAGTATGAGTTTGAGGTTCAAAACAAGGTCTCCATCAACTGGCTCCTCGGTTTAGGCCCCGGTCTAGGAATTATGAGAGTTAAGGGAATTGGCTTAATACATACAGATCTTGTCTCAGGTATCCCAGCTATTTTCTCTCACTTTGTTACCAATCTGCCAGCTTTTCATGAAGTTTTGATCTTCCTCTGTGTCAAATCTGTCCCGGTGCCGCATGTTAGACCGGAAGAAAGGTTCTTAGTTGGTAGAGTTGGGCCAGAGGAGTATAGGATTTATAGATGCATAGCACGGTATGGCTATCGCGATTTTCACAAGGATGATGTTGAGTTCGAGAGAGATCTTTTTTGCAGCATAGGAGAATTCATCCGATCAGAAACTCCTGAATACGGATTAGGACTAAGTCATTTCCAAGAGGATATAAGGATGACAGTTGTTGGTACTTCATCAGAAAATGTAGATTGTGTAAGGATGTCTGAAGATGACATTCATGATAGTGAACATAATCGTGATCGTGATCGTAATCATCAATCTTCAGAGTTGATGGAAGTTATTAAACATTCTCCGAAAAAAGTGAAGAAGCGAGTGAGGTTTTTGTTGCCAGATAGTCCACAGATAAATATGGATGCAATGAAGGAGTTGCATGAGATAACAGAAGCAAAGGAAGCAGGGATGGCATATATACTGGGAAACTGTTATGTGAGAGCAAAAAGTGGATCAAGTTGGATAAAGAGAGTTGTTATCAATTATGGTTATGATTTCTTGAGGAGAAATTCTAGAGGACCAAGTTATGCTTTAAATATACCTCATGCATCAACCTTAGAGGTGGCTATGATATATCATGTATGA 2361 0.3952 MDIIQSVLFKNPIKDESWKTVLTLAYQSLGVVYGDLSTSPLFVYKSTFAEDIQNSETNEEIYGVLSFVFWTITLVPLFKYVFIVLRADDNGEGGTFALYSLLCRHARVSLLPDTQLADEDLIEYTTDESSVPAYKNNVGFGLKKLLEKHRVLKKVLLVLALIGTCMVVGDGVLSPAISVFSAVSGLELSMSKEHHENIEVPIACIILVFLFSLQHYGTHRVGFLFAPIVLIWLLSISAIGVYNIFHWNPHVYEALSPYYMYKFLKKTEKRGWMSLGGILLCITGSEAMYADLGHFSQLSIQIAFTFLVYPSLILAYMGQAAYLSKHHSHQNDCQIGFYVSVPVQLRWPVLVIAILQAVVGSQAIITGTFSIIKQCSSLGCFPKVKIVHTSSKMHGQIYIPEINWSLMLLCLSLTIGFRDTKRMGNAAGLAVITVMLVTTCLMSLVIVLCWHKNVLLAICFLLFFGSIEALYFSASLIKFFEGAWVPIALSFFFLVIMYVWHYGTVKKYEFEVQNKVSINWLLGLGPGLGIMRVKGIGLIHTDLVSGIPAIFSHFVTNLPAFHEVLIFLCVKSVPVPHVRPEERFLVGRVGPEEYRIYRCIARYGYRDFHKDDVEFERDLFCSIGEFIRSETPEYGLGLSHFQEDIRMTVVGTSSENVDCVRMSEDDIHDSEHNRDRDRNHQSSELMEVIKHSPKKVKKRVRFLLPDSPQINMDAMKELHEITEAKEAGMAYILGNCYVRAKSGSSWIKRVVINYGYDFLRRNSRGPSYALNIPHASTLEVAMIYHV 786
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1871 786 Pfam K+ potassium transporter 26 607 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lal13g1871 786 PANTHER POTASSIUM TRANSPORTER 6 5 786 - -
Lal13g1871 786 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 5 786 IPR003855 GO:0015079|GO:0016020|GO:0071805
Lal13g1871 786 TIGRFAM kup: potassium uptake protein 24 786 IPR003855 GO:0015079|GO:0016020|GO:0071805
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1871 Lal-Chr13 18155755 18163014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1871 10 786 Inorganic Solute Cotransporters AT5G14880 74.235 0.0 1179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1871 K03549 - gmx:100793387 1301.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1871 13 18155755 18163014 Lal13g1871 13 18155755 18163014 ECH
Lal13g1871 13 18155755 18163014 Lal24g1428 24 15599004 15606625 LSH