Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1847 ATGGATAGAAGATTATGGCACAGAGATTTGGTACCCTTTGTGGTACTTGTGGCTAATGAATGCAGCAACACTGGTTTATTCACTCTCTTCAAAGCAGCTACCATCAAAGGAATGAGTGACCATGTTTTTGTTGCATATGCTTATGTTGTTGCTACTATTCTACTCCTTCCAATATCTTTTTTCTATAGAAGATCAAGAGTTGTTAATCCTCCACTGAGTTTTTCCATCCTATACAAAATTGCTATTCTTGGGGTTATAGGATGTTCATCTCAGATATTGGGATATGCAGGCATCAAATACAGTTCTCCAACACTTTCTTCTGCAATCAGTAACCTTGTTCCAGCTTTCACTTTCATACTTGCTGTCATTTGCAGGATGGAAAAGATAGTTATGCAAACTAGAACTACACAAGCTAAGATTTTGGGCAGCATTATATCAGTATTAGGTGCATTTGTAGTGACTTTCTACAAAGGCCCATCAATCATTTTTGGTGATGCTTTTCCTTCCTTTCAACTTCAACAATCAAATCTCATTCTTGATCCAATGGATATAAATTGGATCATTGGAGCATTTCTGCTAACAGCTTGCAATATACTACTTACACTATGGTTAATTGTACAGGTTGAGATTTTGAAGGAGTTCCCTGATGAAATAACTATGGTCTTCTTTTACAACTTCTATGCTGCCATAGTAGCAGTAATTGTAGGGTTGTTAGCAGAGAGAAATAGCAGTGCTTGGAAAATAAGACTAGATATATCACTCATTTCCATTGTTTGCACTGGAATATTCAATAAGTTCTTGAGCAGTACAATATATGCATGGGGAGTAAAGTTAAAAGGGCCTGTATATGTAGCAATGTTCAAGCCACTCTCAATTATTATTGCTGTTATCATGGGTGTTATGTTCCTTGGTGATATTCTTCATATTGGAAGTATAATCGGAGCCACAATAATATCAATTGGGTTTTATACTGTAATGTGGGGCAAAGGAAAAGAAGAGAAGGAGGAAGATGTTAATAGCTTGCAGGAATCACTAAGTACTGAAAATGTTCCTCTCTTGCAAAGCTATGAAAATGTAAATTCTAAGAAGAAAATAGATGGAAATGTATAA 1110 0.3595 MDRRLWHRDLVPFVVLVANECSNTGLFTLFKAATIKGMSDHVFVAYAYVVATILLLPISFFYRRSRVVNPPLSFSILYKIAILGVIGCSSQILGYAGIKYSSPTLSSAISNLVPAFTFILAVICRMEKIVMQTRTTQAKILGSIISVLGAFVVTFYKGPSIIFGDAFPSFQLQQSNLILDPMDINWIIGAFLLTACNILLTLWLIVQVEILKEFPDEITMVFFYNFYAAIVAVIVGLLAERNSSAWKIRLDISLISIVCTGIFNKFLSSTIYAWGVKLKGPVYVAMFKPLSIIIAVIMGVMFLGDILHIGSIIGATIISIGFYTVMWGKGKEEKEEDVNSLQESLSTENVPLLQSYENVNSKKKIDGNV 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1847 369 PANTHER WAT1-RELATED PROTEIN 8 353 IPR030184 GO:0016021|GO:0022857
Lal13g1847 369 Pfam EamA-like transporter family 26 154 IPR000620 GO:0016020|GO:0016021
Lal13g1847 369 Pfam EamA-like transporter family 188 326 IPR000620 GO:0016020|GO:0016021
Lal13g1847 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 229 331 - -
Lal13g1847 369 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 157 - -
Lal13g1847 369 PANTHER WAT1-RELATED PROTEIN 8 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1847 Lal-Chr13 17957533 17960469 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1847 1 358 Nodulin-like Gene Family AT3G28050 49.459 9.68e-120 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1847 - - gmx:100791805 548.125