Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1834 ATGTACGGATTCGAAGCTATGACTTTCAACATCCACGGTGGTTACCTAGAAGCCATCGTCCGCGGCCACCGTGCCGGACTTCTCACCACCGCCGACTACAACAACCTCTGCCAATGTGAATCCCTTGACGACATCAAGATGCACCTCTCCGCCACCGATTACGGTTCTTACCTCCAAAACGAACCTTCACCATTGCATACAACTACAATTGTGGAGAAATGTACTCTGAAACTTGTTGATGATTACAACCATATGTTGTGTCAAGCTACTGAACCTTTATCCACCTTCCTTCAATACATCACATATGGTCACATGATAGACAATGTTGTTTTGATTGTTACTGGAACCTTGCATGAGAGGGATGTCCAAGAACTTCTAGAAAAATGCCATCCACTGGGCATGTTTGATAGTATTGCCACACTGGCAGTTGCTCAGAATATGCGGGAGCTTTACAGGTTGGTACTTGTTGATACTCCTCTCGCTCCGTACTTCTCCGAGTGCATTACATCAGAGGACTTGGATGACATGAACATAGAAATAATGAGGAATACTCTTTACAAGGCATACCTTGAAGACTTTTACCGATTTTGTCAGAAACTTGGTGGTGCTACTGCTGAGATCATGTCTGACCTTCTAGCTTTTGAGGCTGATAGAAGGGCTGTGAATATTTCCATAAACAGCATTGGTACCGAGCTCACTAGAGATGATCGTAGAAAGCTGTACTCTAATTTTGGTTTACTATATCCCTATGGACATGAGGAACTTGCTGTTTGCGAGGACATTGATCAGGTTCGTGCTGCTATGGAAAAGTATCCCCCTTACCAGTCTATTTTTGCAAAGTTATCATATGGAGAGAGCCAAATGCTTGACAAGGCATTCTATGAGGAGGAGGTGAAGAGGCTTTGCTTGGCGTTTGAGCAGCAGTTCCATTACGGCGTATTCTTCGCATACATGAGGCTAAGGGAGCAGGAGATCAGGAACCTAATGTGGATTTCAGAATGTGTGGCACAGAACCAGAAGTCTAGAGTTCATGACAGTGTGTTGACTCACTTGGATTTGAAACCCATACTCCGCCGTGGTCGCCGCTGCATGATGATGTTACCCACCACCACTCTCACTCTCACTCTCCACCTCTTCTTCATCCTCTTCCTAACCACCACAAACACCGGCGCCACTCCAATCATAGGCCTAGACTCCTTCCTAACTCACCAATCTCGCATAGATCCCCACTCCTCCAACGACTCCTTCACCTCTCTCCCTCCCTCAATCAAATCCTCTCTCTCCCTCTCTCTCTCTTCTCTCTCCCTCTCTCTCTCTCTCCCTCTCTCCCTCTCTCTCCATCTCATCGGCGACTTCCCTCCCTCCACCTCCTCCCTCCTCTCCTCCTTCCTCTCCGCCGCCACTCAACCCAACCACCACTTCCACGTCATCAACCACCACTCCCACCCCCTCTCCATCTCCCACTCCCTCCACCTCCACGTCACCACCTCCTCCCCTTCTCTCTCCTCTCTCATCTCACAGTCTATTCTCTCTCATCTCCGCAATGCCACGTCATCACTCCGTAACCCTCTCCTCTCTATCCCTTACTCCTCCGTCGATCAATTCGTCAAAAAACACTTCGATTCTTCGAAATCCAACGACGCCGTTTCGATCTATCTCATCAATTTACCTCAAGATTCGACGCAAACGAAACCCTACGCTTATAGCTACACCGGTAGTAGAGAATCTTCTCCTGGTTATACTAGTTGCTTGGGAACGTTCTGGACCGCGAGAGATCGTTACGTTTGGATTGATTTAGGTGCTGGACCTGTTGATTATGGTCCGGCTATCTCCGGTGATGGTGTTATTCCTCGCGGCGAGTTTCATCCGTTCGCTGCTGCGCTTCGTGGAAGGCCACCGAAGTCTCAGAAGGCGTTTGTTGCTGACCTTGCTTCACTTGTTTGGAGTGCTTATCAGTTTATTCATGTGTGTGGTGGTGGTGGATGTCATGATGGTGGTGATGGTAAGAAGAAAGATGGTTATTTGAGTGGTTTAGATTGGAAGTTGATTGAGAAGAGTTTTACGGATGAGGTTGTTGAGAAGGGTTTGTTGTTAGGTGATCAGTCTTTGAGTTTTAAGGAGTATGAGATTAAGTATTCAGAGTGTCCAATTTGTTCATTTGCTATCTCGCGCTCGATTAATTCGTATACTTCGAGGTTTTTGTTTGATAACTATACTTTGATTGTGAATGAGTATTTGGACTCGAAGAAGTTGCATCAGGTTTTGTCTGATTCGGCCGGGGAGTTTAGGAGGCTGGCTAGTGTGCCAGAGGAGGATTATGGTAGGGTTGTGCCGGTTTATGTTTTCGACTTGGATTATAATTCAGTTCTATTGCTTGATCGGTATCATCAGTCTGTTGCGTTTAAGGACATGGTTATTGCAGTTAGGACAAGGAACACACATACTGTGAGTGATTATAGCTGTAATGGTCGCCATGTGTTTACGCAGACGAGGGAACTTGAGAGGCCGATTGTTGGGTCAATTCTGCAGAGTATGTGGGGAGTGTCGCCAACGCATATGTCTTGGAGCCCGAGACACAATGATACTTTGGTGGATTATACGTGGAGTATGGGGCAGACACCGTTCGGGCCTTTCTCAGAGATGTTGTCTCTGTCTTTTGTTCAGAAAGATGCAGCGCGTAGAAATGTTCTGCTGACATCCTTAAATTACAGCATAGCGAGCGCTATGGATGTTCTTCAGACCATAGAATCACATGGTGGAGATAGAAATCTGCTTAAGCCAAAGCAGCATGTTGAGTTTGTTCAGAGATGGAATCTTTTCAAGTACAAGCTGAACAAGGTGGTATCTGCATTGTCACATTTGGACTTTGAGATTGCTTTGTTTTACTTGAGGTCTTCTGACCATGATCTGTATGCCCTCCACTCTATTGTGTATCACGCCTCTCAAGAAATAGAAGCATCCCTTGTGTGCTTCAAGGACCCTTCATTTCCCTGGTTTCCAGTCTCAACTTCGGCAGTGGCTTTCCTTGCTCTCTCTTATGTTATAGTATCCCTATTAGTGAAGAGCAATCCTTTTTCAGGGCTTAATTAG 3090 0.4625 MYGFEAMTFNIHGGYLEAIVRGHRAGLLTTADYNNLCQCESLDDIKMHLSATDYGSYLQNEPSPLHTTTIVEKCTLKLVDDYNHMLCQATEPLSTFLQYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYRFCQKLGGATAEIMSDLLAFEADRRAVNISINSIGTELTRDDRRKLYSNFGLLYPYGHEELAVCEDIDQVRAAMEKYPPYQSIFAKLSYGESQMLDKAFYEEEVKRLCLAFEQQFHYGVFFAYMRLREQEIRNLMWISECVAQNQKSRVHDSVLTHLDLKPILRRGRRCMMMLPTTTLTLTLHLFFILFLTTTNTGATPIIGLDSFLTHQSRIDPHSSNDSFTSLPPSIKSSLSLSLSSLSLSLSLPLSLSLHLIGDFPPSTSSLLSSFLSAATQPNHHFHVINHHSHPLSISHSLHLHVTTSSPSLSSLISQSILSHLRNATSSLRNPLLSIPYSSVDQFVKKHFDSSKSNDAVSIYLINLPQDSTQTKPYAYSYTGSRESSPGYTSCLGTFWTARDRYVWIDLGAGPVDYGPAISGDGVIPRGEFHPFAAALRGRPPKSQKAFVADLASLVWSAYQFIHVCGGGGCHDGGDGKKKDGYLSGLDWKLIEKSFTDEVVEKGLLLGDQSLSFKEYEIKYSECPICSFAISRSINSYTSRFLFDNYTLIVNEYLDSKKLHQVLSDSAGEFRRLASVPEEDYGRVVPVYVFDLDYNSVLLLDRYHQSVAFKDMVIAVRTRNTHTVSDYSCNGRHVFTQTRELERPIVGSILQSMWGVSPTHMSWSPRHNDTLVDYTWSMGQTPFGPFSEMLSLSFVQKDAARRNVLLTSLNYSIASAMDVLQTIESHGGDRNLLKPKQHVEFVQRWNLFKYKLNKVVSALSHLDFEIALFYLRSSDHDLYALHSIVYHASQEIEASLVCFKDPSFPWFPVSTSAVAFLALSYVIVSLLVKSNPFSGLN 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1834 1029 SUPERFAMILY V-type ATP synthase subunit C 14 347 IPR036079 -
Lal13g1834 1029 Gene3D - 206 309 IPR035067 -
Lal13g1834 1029 Pfam ATP synthase (C/AC39) subunit 16 344 IPR002843 GO:0046961
Lal13g1834 1029 PANTHER TRANSMEMBRANE PROTEIN-RELATED 675 1014 - -
Lal13g1834 1029 PANTHER TRANSMEMBRANE PROTEIN-RELATED 381 654 - -
Lal13g1834 1029 Gene3D ATP synthase (C/AC39) subunit, domain 3 14 335 IPR044911 -
Lal13g1834 1029 PANTHER TRANSMEMBRANE PROTEIN 675 1014 - -
Lal13g1834 1029 PANTHER TRANSMEMBRANE PROTEIN 381 654 - -
Lal13g1834 1029 Gene3D - 91 199 IPR035067 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1834 Lal-Chr13 17796675 17803385 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1834 1 348 Primary Pumps ATPases(2) AT3G28710 93.391 0.0 704
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1834 - - lang:109336382 1058.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1834 13 17796675 17803385 Lal13g1834 13 17796675 17803385 ECH