Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1827 ATGTCCATAAAAGTAGGGTCAAATAAAGCATGTGCTGCTTGCAAATACCAAAGAAGAAAGTGCTCCAAGGAATGCCCTCTAGCTCCATATTTCCCGTCCGATAAACCTAAAACATTCAGCAACGCTCATCGATTGTTCGGAGTATGCAACATAACACGGATATTGAATCATGTAAAACCACATGAGAGAGATGAGGCGATGAAATCAATCATATTTGAGTCTGATGTTCGCGCAAAATTCCCGGTCGAAGGTTGTTATGGTGTTACAATGTACTACAATTATTTGATCACTAAGGCTAAGGAAGAGTTAAGTTATACAAAAATGTTACTTGCGAATATTAAACAACATCATATTGTTATGCCTCTTGATCCAACTATGTCTCTCCCTCCTATTCCGATTGATCTATGCTCGATTTCACCTACCCATAGAGATGAATTTCCAATCTATAATCATGATCAAGATTCTTCTTTCTTTGATCCAAATTTAGGTCAAGTTTATGATGCTAATGATTATATGGAAAATAATGATATTTATATGGAAACATCACCTTGTATGAGTGACATCATTAATGATGTTAACACAAGTTTTTTAGATGAAAAATCTACTTCTATGTCAATGGATGAACCTATTGCTCTTGAGAACAACACACATTCAATGGACACAGGATCTTCAGAGTTTAATTCATCCAATCATCACAAAAGAGACATTTCTGAATATTATCAAGATACAACATCTTTTGATGAATTTGGTAACAATATAAGAGCATTTGTGGATTGCAAGGATGCATGCAAACTATTCATTCATTGTCCAGATTCGATTTTGTTTTCCCCCTCATATGTTTCTTGGTCCTCACTTTCATTCAGGTTTGAATAA 873 0.3494 MSIKVGSNKACAACKYQRRKCSKECPLAPYFPSDKPKTFSNAHRLFGVCNITRILNHVKPHERDEAMKSIIFESDVRAKFPVEGCYGVTMYYNYLITKAKEELSYTKMLLANIKQHHIVMPLDPTMSLPPIPIDLCSISPTHRDEFPIYNHDQDSSFFDPNLGQVYDANDYMENNDIYMETSPCMSDIINDVNTSFLDEKSTSMSMDEPIALENNTHSMDTGSSEFNSSNHHKRDISEYYQDTTSFDEFGNNIRAFVDCKDACKLFIHCPDSILFSPSYVSWSSLSFRFE 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1827 290 Pfam Lateral organ boundaries (LOB) domain 10 106 IPR004883 -
Lal13g1827 290 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 7 201 - -
Lal13g1827 290 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Lal13g1827 290 PANTHER LOB DOMAIN-CONTAINING PROTEIN 27-RELATED 7 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1827 Lal-Chr13 17721530 17722721 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1827 1 103 AS2 family AT3G47870 57.282 6.86e-38 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lal13g1827 LOB 5.7e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1827 - - lang:109346924 285.419