Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1826 ATGGAGCATATGAATATGAGTATGACAACCATTAATGATGCATCAAATGGTGAAAGTGGATTAGTATCAATGATTGGTGGCAGCGGTGGTGAAGGTGGTGGTGGTGGTAATGGTGGTGGTGGGGTGGAAGAGGTGGCTCTAAAGAAGGGTCCTTGGACAACGACAGAGGATGCTATTCTCATAGACTATGTGACAAAGCATGGTGAAGGAAACTGGAATGCGGTGCAGAGGAATACTGGGTTGGCTAGATGTGGCAAGAGTTGTAGGCTTAGATGGGCTAACCATTTGAGACCAAATTTGAAGAAGGGTGCTTTCTCCCATGAGGAAGAGAAACTCATTGTTGAGCTCCATTCACAGTTTGGCAACAAATGGGCTCGAATGGCTGCTTTGCTCCCCGGGAGAACAGACAACGAAATCAAGAACTACTGGAACACAAGGGTGAAGCGACGTCAGAGACAAGGTCTTCCACTGTATTCAGATGACAATGATCACCCTACAACACCCACTACACCCACCACCCCTTCTCAATTTCTCAACCAAACAGGATCAAACACAAACACAGTCACAAAGTTTGATTTTCTTCATCAAAACTATCATCACCATAGTCCACTTTCTCCAACAGCACAACAATCCCATCATCATCATTCTCCTCTATCTTCACCACTCAACCATAGACCACCACCTTCCTACTCCCCTCACCATTTCATGGACCCTACACCCTCCTATTCCAATCCACAATTGTCCTCAGCTGGACCTTCCTCTCTCTCCTTTACCTTCCAAAGACCAACACCAATGCTAGGTAACCCTCTTCGATTCAAGCGATACCGTTCCTCTCCAAACTTCAGCCTCCACCATCTCCCTTCCATCACCCCTTACTCAACCTCTGCACCCCCTGATCAGATGGCTGATCTTGATGCATTCAGGTTCCCACAACAGAACAACTCCAGTTTTTCACCACAGTATTTTCAGACGGATTTGTTAGATTCCAATCGAATGGTTTCGACCCAGAATTCAGTTTTCTCAACCAAATTGGAGCTCCCTTCAAACCAATATTCTCAGCCACAACTGCAGCAAGAGATTAAGCATGATTTAGAGTTCAATGATCCTACTTTTCAAACAAGTAGTGGATTGCTAGGGGATCTTCTTTTTGAAGCTCAGGCAATAGCATCTGGCCAGAACTCGAAGAAACGAAATTATTTGAGCTTAAACGAAGGAAATGATGTGTTTGATGGATACCAAAATTTTGATGACTGGCCTCTTTGCTCTAATTACTGGTCTTCTTCTACTTCAGGTAAATGA 1299 0.4457 MEHMNMSMTTINDASNGESGLVSMIGGSGGEGGGGGNGGGGVEEVALKKGPWTTTEDAILIDYVTKHGEGNWNAVQRNTGLARCGKSCRLRWANHLRPNLKKGAFSHEEEKLIVELHSQFGNKWARMAALLPGRTDNEIKNYWNTRVKRRQRQGLPLYSDDNDHPTTPTTPTTPSQFLNQTGSNTNTVTKFDFLHQNYHHHSPLSPTAQQSHHHHSPLSSPLNHRPPPSYSPHHFMDPTPSYSNPQLSSAGPSSLSFTFQRPTPMLGNPLRFKRYRSSPNFSLHHLPSITPYSTSAPPDQMADLDAFRFPQQNNSSFSPQYFQTDLLDSNRMVSTQNSVFSTKLELPSNQYSQPQLQQEIKHDLEFNDPTFQTSSGLLGDLLFEAQAIASGQNSKKRNYLSLNEGNDVFDGYQNFDDWPLCSNYWSSSTSGK 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1826 432 ProSiteProfiles Myb-like domain profile. 44 96 IPR001005 -
Lal13g1826 432 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 30 403 - -
Lal13g1826 432 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 30 403 - -
Lal13g1826 432 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 44 96 IPR017930 -
Lal13g1826 432 MobiDBLite consensus disorder prediction 1 43 - -
Lal13g1826 432 CDD SANT 51 96 IPR001005 -
Lal13g1826 432 SUPERFAMILY Homeodomain-like 47 143 IPR009057 -
Lal13g1826 432 Gene3D - 48 101 - -
Lal13g1826 432 MobiDBLite consensus disorder prediction 160 184 - -
Lal13g1826 432 MobiDBLite consensus disorder prediction 200 217 - -
Lal13g1826 432 CDD SANT 104 145 IPR001005 -
Lal13g1826 432 Gene3D - 104 150 - -
Lal13g1826 432 Pfam Myb-like DNA-binding domain 102 145 IPR001005 -
Lal13g1826 432 Pfam Myb-like DNA-binding domain 49 96 IPR001005 -
Lal13g1826 432 MobiDBLite consensus disorder prediction 1 22 - -
Lal13g1826 432 ProSiteProfiles Myb-like domain profile. 97 147 IPR001005 -
Lal13g1826 432 SMART sant 101 149 IPR001005 -
Lal13g1826 432 SMART sant 48 98 IPR001005 -
Lal13g1826 432 MobiDBLite consensus disorder prediction 198 262 - -
Lal13g1826 432 MobiDBLite consensus disorder prediction 236 262 - -
Lal13g1826 432 MobiDBLite consensus disorder prediction 144 184 - -
Lal13g1826 432 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 97 151 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1826 Lal-Chr13 17715173 17716883 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1826 46 158 MYB Transcription Factor Family AT3G11440 84.071 8.63e-66 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lal13g1826 Myb_DNA-binding 3.2e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1826 - - lang:109329119 604.364