Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1789 ATGGAAAATTTAAGAGTTGATAATAAGATGATGGTAATGGTGATTATAGGGTTACTTGCATTGTACCCATTGATGGTGATAGGAGGTCCTATTAGGCATAAAGTTGGAGGGAGAAAAGGATGGAATCCAAACGTGAATTACACTGAATGGTCTTCTCAGGAACATTTCTACGTTGGGGATTGGCTATTGTTTATCTTTGACAAACATTACTACAACATTCTTGAAGTGAACAAGACAAGCTATGAAAACTGCATAGACAATGGCTTCATCAAGAACTTGACACGTGGCGGCCGCGACGTGGTTGAGTTGAAAGAGGCAAGAACATACTACTACATATCTAGTGGAGGATACTGTTTTCATCAAATGAAAGTTGCTGTGCATGTTGAAGAACACCAAGCACCAATAACAGCATCACCACCACCTTCAATAATGAATTCTTCTTCTATTTTGTCTTCTGTGTACACATGCACTTTCATCATTCTTGCTAATGTGTTTTTCATGAATTTGGTTTCAATTGGTGCTTTTTAA 528 0.3788 MENLRVDNKMMVMVIIGLLALYPLMVIGGPIRHKVGGRKGWNPNVNYTEWSSQEHFYVGDWLLFIFDKHYYNILEVNKTSYENCIDNGFIKNLTRGGRDVVELKEARTYYYISSGGYCFHQMKVAVHVEEHQAPITASPPPSIMNSSSILSSVYTCTFIILANVFFMNLVSIGAF 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1789 175 Pfam Plastocyanin-like domain 41 115 IPR003245 GO:0009055
Lal13g1789 175 PANTHER BLUE COPPER PROTEIN 11 158 IPR039391 GO:0009055
Lal13g1789 175 Gene3D - 31 139 IPR008972 -
Lal13g1789 175 ProSiteProfiles Phytocyanin domain profile. 31 130 IPR003245 GO:0009055
Lal13g1789 175 SUPERFAMILY Cupredoxins 32 128 IPR008972 -
Lal13g1789 175 PANTHER EARLY NODULIN-LIKE PROTEIN 20 11 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1789 Lal-Chr13 17388119 17389787 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1789 10 165 Phytocyanin Superfamily AT5G15350 39.490 7.40e-37 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1789 - - gmx:100788336 205.682
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1789 13 17388119 17389787 Lal13g1789 13 17388119 17389787 ECH
Lal13g1789 13 17388119 17389787 Lal24g1355 24 14821299 14822333 LSH