Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1788 ATGGAAATTGTACCAAACATGGTTATAGTGATTGTAACATGTACTATGATTCTTGTGATGTTGCCAGAAGCTTCTGCTACAAGGTGGACTGTAGGAGGAAACATGGGTTGGAACACAAATTTTAACTATACTACTTGGGCTAAGGGCAAACATTTCTACAAAGATGATTGGCTATTTTTTGTGTATGATAGGAACCAAATGAATGTATTAGAGGTGAACAAGACAAACTATGAAAGCTGTAACTCTGATCATCCACTTCACAATTGGACCACTGGTGCTGGAAGAGATGTAGTTCCATTGAATGTGACAAGAAATTACTATTTTATTAGTGGCAAAGGTTTCTGCTATGGTGGCATGAAGGTAGCTATTCATGTTGAAAATTTACCACCTCCTCCTAAAGCTTCTCCATTAATATCTGAAGCATCATCAATTATATCTTCTACAACTCAAATTATTCTCTTGCCTATTGTTTTTGCCATAGGAGCAACATGGGATGCATTTATTAATTTATGA 513 0.3606 MEIVPNMVIVIVTCTMILVMLPEASATRWTVGGNMGWNTNFNYTTWAKGKHFYKDDWLFFVYDRNQMNVLEVNKTNYESCNSDHPLHNWTTGAGRDVVPLNVTRNYYFISGKGFCYGGMKVAIHVENLPPPPKASPLISEASSIISSTTQIILLPIVFAIGATWDAFINL 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1788 170 Gene3D - 25 128 IPR008972 -
Lal13g1788 170 PANTHER BLUE COPPER PROTEIN 7 163 IPR039391 GO:0009055
Lal13g1788 170 ProSiteProfiles Phytocyanin domain profile. 27 127 IPR003245 GO:0009055
Lal13g1788 170 Pfam Plastocyanin-like domain 37 119 IPR003245 GO:0009055
Lal13g1788 170 SUPERFAMILY Cupredoxins 26 125 IPR008972 -
Lal13g1788 170 PANTHER LAMIN-LIKE PROTEIN 7 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1788 Lal-Chr13 17381543 17384040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1788 7 165 Phytocyanin Superfamily AT5G15350 51.250 1.61e-61 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1788 - - mtr:MTR_6g013420 271.166
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1788 13 17381543 17384040 Lal13g1788 13 17381543 17384040 ECH
Lal13g1788 13 17381543 17384040 Lal24g1354 24 14814382 14817081 LSH