Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1768 ATGTGTAAGAAAGTTATGAAAACAATGAAGGATGAAAATTCAGATTTGCAGAAGCAGATTGGGTGCATCAGTGGATTCTTTCAGTTGTTTGACTGCAACAGGTTCCTCACAGAACAAAGCAGTGGCAGTAGCAAGAGTCAGAACAGACCTACTCTAGGGCCAGGTGGAACTAGTAATGACATCAAAGAGAAAAGTAATACAATGCAAAAAGCAGGGGCAAATAATGTAATGGTTGCAAAAGAGATTCAACAATTCTCAACAGAATCATCAGGAACATCAAACTCTTCATCATCTTGTTCATCAAGCATGTCATCCCTCGAGTTTAACCGAACAATTCGGATAGAACAACCATCAATCTTTCCAATCAAAATTGCAGACAATTTCAATGCAGCTGCAGCAATGAAGCAACTTGATTTCTATGATGTTGTTAAAGGCTCAATGCATAGAGAATCCAAAGGATTGGCAGTGAAAACTGCGAATATAGACGAAAAGAAACGCCGAGTTTTAAAATTTATAGACTCTCCAAGGCCTTTGCAGCCATACAAATCTGTTAATAGGCCTTTGGATTCACCAAGGCTTTCTTATGATGGCAGGGATATGCATGATTCATTCAAGTCTTCTACAAAGCACAAGGAACTTCCAAGGCTTTCTTTGGATAGTAAACAAGGATCCTTTAATGGTTTCAATGATGGAACAAAATCTAATAACCTTTTGAAGGGTCCAAACAAAGGGTATGGAGGCACTAGCACAATGGTTAAACAGCTGCAAGAATCAGAAACTCATGGAAGATCATCATCATTATCATCTAGTGTTGTAGCTAAGTTAATGGGACTAGAAGGCTTCGCAGGCGCGACGCAAACTTGTGATACTCCTCCTAGCATGAGTGATGCATACAAGCAACACCAAAGTTCTGTTTCACCGAGGACAACGAATGGAAGCCGAGATTCTCAATTGCAGGCTTCCAAGGGAAGTGATTTTTCAATAAAGGCCTCAAATTCTGTCCTATCTGTATATGGGGAAATTGAGAAAAGGATGGCTAATCTTGAGTTCAAAAATTCGGGAAAGGATCTTAGAGCGCTTAAACAGATTCTCGACGCGATGCAAAGATATAAAGATACATTAGATGTAACAAGAGACCAGGCTTCAAATTCTTCATCTCATAGTAGGAGCAATAGTAGTTTCAGTGAAAGCTCCAAAGTGCATAGCCCAAGAATAAGACAGAAGGATCCAACAACATCTGCCGCAGCCGAGAAGTCTAATCCGAATAATGTTAGTAAATCGCCAATTGTGATCATGAAACTAGCAAAAGTTACTAGAGAAACCAATAATCTTGTTAACCACAAAAATGGAAGATTGTTTGATAAGCATGATGGGCAAAAATCAAATGGTATGAGTCCAAAAAGCAGACATAATAAGATGAGAACTTCAAAATTGATGCAATCCTCAAAAGTTTCACAAGTCATCAATGGAGCAAACACTATCAACTCAAGCAATACAGCAGAGACGAGGAGCCCGAGATTACAAAAGAAGTTTGGTTTCGAGAGGCGTTCGCCACCAATTAGTCCATCACCAGATTCCAGCAGTAACAGAAGACAACATAATAGGCAATCATTGGAATTGAATTCCCCAAGTACATCACCAAGACAAAAATTCTCTACTTTGCACGAAACAAATGACGGTTTCAGCGAGCTCAGATATCAAAGGAGGGATTTTAAGCATGAAGTTGATATTATATCCCAAGATTTTGACAGCAAAAGAGGCATGGACCCTCACAGTGACATAGTAGCCACTCATGTTGATCATTCTGAAAAGAGCAACACCACCTTCATCCATCCGAATAGCCCGAATCACAATAATGCAACGAAAGAGTTGAGCAAAGATAGCTTTATGGCCGAGAAAATAGTTACTGCAGAACAACCAAGTCCCGTGTCGGTTCTTGATGCAGCATTCTATATAGAAGATCCACCTTCTCCAGTTAAAAAGAAACCACACATCTCAAAAGATTTAGATGAAGCTTTAAATGCTTATGATAGTTGCAAGGAGAACTCACAAGATCTTCAACAAATTCACTACAATAACGAGAGATTACCCGATATCAGCGACATTAACAATCCTGATCATAAATACATATCAGAAATACTGTTAGTATCAGGGCTGCTAAGCAGTGCTGGCTATAGCCAGGCAGTTAACTCATCAGCGCACCCGATTAACCCGAAGTTGTTCCTTGCACTAGAACAAATGAAGACTAGCAAGTTGCATTTCAATAATCCTAAGAAAATGCAAAGAAAACTCATATTTGATGTTGTGAATGACATTCTAGTTCAAAAGCTGATATTGGAGAGTTCATCCACACTGTCTAGCTTTCCGAATCTTCCAACAGGAAGAAAACTAAAAGGGCAGCAGCTTTTGGAAGAGATTTTCACAGAAATAAGTCAGTTACAACATAAAGATAGGAATGTCAAGTTGGCTAATGAGGATGAGTATTTGACAAACCTCCTATGGGAAGATTTGATGCATCAATCCACGATTTTCACCGAAACTCGCATCGAGATACCTAATGTTGTGTTGGATATTGAAAGGTTGATCTTTAAAGATTTGATAACTGAAGCTGTGAGAGGTGAAGTTGCTAACTATCCTAGTAGGCATTGCAGACAAACTTAG 2661 0.392 MCKKVMKTMKDENSDLQKQIGCISGFFQLFDCNRFLTEQSSGSSKSQNRPTLGPGGTSNDIKEKSNTMQKAGANNVMVAKEIQQFSTESSGTSNSSSSCSSSMSSLEFNRTIRIEQPSIFPIKIADNFNAAAAMKQLDFYDVVKGSMHRESKGLAVKTANIDEKKRRVLKFIDSPRPLQPYKSVNRPLDSPRLSYDGRDMHDSFKSSTKHKELPRLSLDSKQGSFNGFNDGTKSNNLLKGPNKGYGGTSTMVKQLQESETHGRSSSLSSSVVAKLMGLEGFAGATQTCDTPPSMSDAYKQHQSSVSPRTTNGSRDSQLQASKGSDFSIKASNSVLSVYGEIEKRMANLEFKNSGKDLRALKQILDAMQRYKDTLDVTRDQASNSSSHSRSNSSFSESSKVHSPRIRQKDPTTSAAAEKSNPNNVSKSPIVIMKLAKVTRETNNLVNHKNGRLFDKHDGQKSNGMSPKSRHNKMRTSKLMQSSKVSQVINGANTINSSNTAETRSPRLQKKFGFERRSPPISPSPDSSSNRRQHNRQSLELNSPSTSPRQKFSTLHETNDGFSELRYQRRDFKHEVDIISQDFDSKRGMDPHSDIVATHVDHSEKSNTTFIHPNSPNHNNATKELSKDSFMAEKIVTAEQPSPVSVLDAAFYIEDPPSPVKKKPHISKDLDEALNAYDSCKENSQDLQQIHYNNERLPDISDINNPDHKYISEILLVSGLLSSAGYSQAVNSSAHPINPKLFLALEQMKTSKLHFNNPKKMQRKLIFDVVNDILVQKLILESSSTLSSFPNLPTGRKLKGQQLLEEIFTEISQLQHKDRNVKLANEDEYLTNLLWEDLMHQSTIFTETRIEIPNVVLDIERLIFKDLITEAVRGEVANYPSRHCRQT 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1768 886 MobiDBLite consensus disorder prediction 377 400 - -
Lal13g1768 886 MobiDBLite consensus disorder prediction 442 559 - -
Lal13g1768 886 Pfam Domain of unknown function (DUF4378) 706 869 IPR025486 -
Lal13g1768 886 PANTHER LONGIFOLIA PROTEIN 1 298 - -
Lal13g1768 886 PANTHER LONGIFOLIA PROTEIN 686 885 - -
Lal13g1768 886 PANTHER LONGIFOLIA PROTEIN 305 444 - -
Lal13g1768 886 PANTHER LONGIFOLIA PROTEIN 467 687 - -
Lal13g1768 886 PANTHER LONGIFOLIA PROTEIN 305 444 IPR033334 GO:0051513
Lal13g1768 886 PANTHER LONGIFOLIA PROTEIN 1 298 IPR033334 GO:0051513
Lal13g1768 886 PANTHER LONGIFOLIA PROTEIN 686 885 IPR033334 GO:0051513
Lal13g1768 886 PANTHER LONGIFOLIA PROTEIN 467 687 IPR033334 GO:0051513
Lal13g1768 886 Coils Coil 669 689 - -
Lal13g1768 886 MobiDBLite consensus disorder prediction 192 217 - -
Lal13g1768 886 MobiDBLite consensus disorder prediction 284 324 - -
Lal13g1768 886 MobiDBLite consensus disorder prediction 286 324 - -
Lal13g1768 886 MobiDBLite consensus disorder prediction 180 249 - -
Lal13g1768 886 MobiDBLite consensus disorder prediction 477 505 - -
Lal13g1768 886 MobiDBLite consensus disorder prediction 407 424 - -
Lal13g1768 886 MobiDBLite consensus disorder prediction 39 63 - -
Lal13g1768 886 MobiDBLite consensus disorder prediction 376 424 - -
Lal13g1768 886 MobiDBLite consensus disorder prediction 449 463 - -
Lal13g1768 886 MobiDBLite consensus disorder prediction 219 249 - -
Lal13g1768 886 Coils Coil 360 380 - -
Lal13g1768 886 MobiDBLite consensus disorder prediction 520 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1768 Lal-Chr13 17242638 17248403 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1768 189 879 TRM (TON1 Recruiting Motif) Superfamily AT5G15580 31.923 9.47e-71 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1768 - - lang:109346929 1238.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1768 13 17242638 17248403 Lal13g1768 13 17242638 17248403 ECH
Lal12g1408 12 17205734 17210772 Lal13g1768 13 17242638 17248403 LSH