Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1745 ATGCAAGCCACAGAGTTAGCAGAACTCAATTATTTACTTCCTTCTCCATACCCTACTAACTACAACACAATTCACAACAACACTATTATTCCAACATTTCAATTTCAAACATTCCCTAATAACCAATTATATTGCTTCCATAACAACAACAACACTCTTCAATTTTCTGATCACTTTAGTCCTCAATCATCAGGTATAAGCAGCAACTCCACTTCTGATGAAGCTGATGATCAAAACCTTAGTCTCATCAATGAGAGGAAACATAGAAGGATGATATCGAATCGAGAATCTGCGCGCCGATCGCGAATGAGGAAGCAAAAACACCTTGATGAGCTATGGTCACAAGTTATGTGGCTTAGGAATGAGAATCATCAACTACTAGACAAGTTGAATCATGTGTCTGAGTGCCATGATCAAGCACTTCAAGAGAATGCTAAACTTAAAGAACAAACTTCAGAACTTCATCAAATGATAATGGATATGCAGATAAATAGTTCATGCCCTTCATTTGAATCATTGGAAGATGTTCCTTGA 534 0.3708 MQATELAELNYLLPSPYPTNYNTIHNNTIIPTFQFQTFPNNQLYCFHNNNNTLQFSDHFSPQSSGISSNSTSDEADDQNLSLINERKHRRMISNRESARRSRMRKQKHLDELWSQVMWLRNENHQLLDKLNHVSECHDQALQENAKLKEQTSELHQMIMDMQINSSCPSFESLEDVP 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1745 177 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 89 104 IPR004827 GO:0003700|GO:0006355
Lal13g1745 177 PANTHER BZIP TRANSCRIPTION FACTOR 1 175 - -
Lal13g1745 177 Pfam bZIP transcription factor 86 144 IPR004827 GO:0003700|GO:0006355
Lal13g1745 177 Gene3D - 84 140 - -
Lal13g1745 177 CDD bZIP_plant_GBF1 87 138 IPR045314 GO:0003700|GO:0006355
Lal13g1745 177 SUPERFAMILY Leucine zipper domain 86 135 IPR046347 GO:0003700|GO:0006355
Lal13g1745 177 MobiDBLite consensus disorder prediction 57 76 - -
Lal13g1745 177 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 84 135 IPR004827 GO:0003700|GO:0006355
Lal13g1745 177 SMART brlzneu 82 146 IPR004827 GO:0003700|GO:0006355
Lal13g1745 177 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 175 IPR044521 -
Lal13g1745 177 Coils Coil 137 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1745 Lal-Chr13 17018270 17018803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1745 12 170 bZIP Transcription Factor Family AT3G30530 59.036 1.52e-51 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal13g1745 bZIP_1 4.3e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1745 - - lang:109335342 305.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1745 13 17018270 17018803 Lal13g1745 13 17018270 17018803 ECH
Lal13g1745 13 17018270 17018803 Lal24g1319 24 14528503 14529102 LSH
Lal13g1745 13 17018270 17018803 Lal6g0747 6 4954092 4954688 PCT
Lal6g0747 6 4954092 4954688 Lal13g1745 13 17018270 17018803 PCT