Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1738 ATGAAGAGAGTACAACTTGTAAGGAAGGAACATCCAACTGATTCAACTGTTCGTGTGAAGATTGTGACATATGGAATTTGTTTGAAGAATCATTCGATTAACCCCAGAGAATGTATTTTAGATGGGTGCCAAGAGTTTATTGCTAATGGAGAAGAAGGTTCAGATGGTGCTCGAATTTGTGCTGCTTGTGGTTGCAATAGGGACCATCATCATAGAGTAGAAAGGGAGATTGAAGCATAG 240 0.3958 MKRVQLVRKEHPTDSTVRVKIVTYGICLKNHSINPRECILDGCQEFIANGEEGSDGARICAACGCNRDHHHRVEREIEA 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1738 79 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 24 73 IPR006456 -
Lal13g1738 79 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 20 75 - -
Lal13g1738 79 PANTHER MINI ZINC FINGER PROTEIN 2 20 75 - -
Lal13g1738 79 Pfam ZF-HD protein dimerisation region 22 74 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1738 Lal-Chr13 16962412 16962651 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1738 19 77 Zinc finger-homeobox gene family AT3G28917 49.180 2.63e-12 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Lal13g1738 ZF-HD_dimer 2.1e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1738 - - twl:119993805 83.9593