Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1705 ATGCGGATGAGTTGTAATGGATGCAGGGTGTTAAGAAAAGGTTGTAGTGAAGATTGTAGCATCAGACCTTGTTTGCAATGGATCAAGAACCCAGAATCACAAGCTAATGCTACTGTTTTTCTTGCTAAGTTTTATGGTCGTACCGGTCTCATGAACCTAATCAACGCTGGTCCTCAACACCTTCGTCCAGCGATTTTTCGGTCATTGTTATACGAAGCATGTGGGAGGATAGTGAACCCAATTTATGGATCTGTGGGTTTATTATGGTCTGGGAGCTGGCAACTATGTCAAGCGGCGGTTGAAGCCGTTTTGAACGGCGCACCAATTACGCCGATAACTTCAGAAGCCGCTGCTAGTGGGAGGGGCCCACCACTCAAGGCCTATGATATACGCCATGTGTCTAAGGATATGAATTCAATTGGTTCAAAACATTCTCAACGAGTTAAGTCTCGAACCCGGTTCAATCGGACCGGAGTAGAAGCGGTTGTTAGTGTCAAGCCGGATGCTAATGATGATTCTCGTTTTGGTCCGGTTGAGCCGGAGTCGGAGGAGGTGGTGAACCGGTCAGCGAGTCATGAGTCGTCGGTTAGTCATCAGTCTGAGGCGGCGGTGGTGATGGTGGAGGGAGAAAGTAAAGATAGTGAGAGTGCGGTGTCGGTGGAAAATTCGGTTTTATTTCATGATGAACCGGAGTCAGATGATAAGGTGGGTGGCCGAACCGGTGAGAGTGGTGAAGAGGTTGGGTTAGAATTAACACTGGGGTTTGAACCGGTATCACGTGTGCATCACGTGGTTCCTGTGAAGAAGAGAAGGATTGAGTTCTTTAAGGATTGCAGTATTGATTTGCATGGAACCTCTTGCAAGATGGAGTTGGGGCTTCTGTATCCGGCTTGA 894 0.4787 MRMSCNGCRVLRKGCSEDCSIRPCLQWIKNPESQANATVFLAKFYGRTGLMNLINAGPQHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLNGAPITPITSEAAASGRGPPLKAYDIRHVSKDMNSIGSKHSQRVKSRTRFNRTGVEAVVSVKPDANDDSRFGPVEPESEEVVNRSASHESSVSHQSEAAVVMVEGESKDSESAVSVENSVLFHDEPESDDKVGGRTGESGEEVGLELTLGFEPVSRVHHVVPVKKRRIEFFKDCSIDLHGTSCKMELGLLYPA 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1705 297 PIRSF AS2 1 294 IPR017414 -
Lal13g1705 297 MobiDBLite consensus disorder prediction 172 188 - -
Lal13g1705 297 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Lal13g1705 297 PANTHER LOB DOMAIN-CONTAINING PROTEIN 40 1 293 - -
Lal13g1705 297 MobiDBLite consensus disorder prediction 163 201 - -
Lal13g1705 297 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 293 - -
Lal13g1705 297 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1705 Lal-Chr13 16697645 16699562 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1705 1 293 AS2 family AT3G02550 59.727 5.71e-110 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lal13g1705 LOB 1e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1705 - - gmx:100786490 417.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1705 13 16697645 16699562 Lal13g1705 13 16697645 16699562 ECH
Lal12g1378 12 16895918 16897746 Lal13g1705 13 16697645 16699562 ECH
Lal12g1378 12 16895918 16897746 Lal13g1705 13 16697645 16699562 LSH