Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1700 ATGCAAGACGAATCAAGGAGAGCTGAAGCAGAACGCTTACTAGGGATTGCAGAAGATTTCTTAAAGAACCGTGATCTAAATGGTTCAAGAGATTTCGCCATTCTAGCCCAAGAAATCGAACCACTCGTAGAAGGTTCGGATCAAGTCTTGGCTATTGTTGATGTTATATCCGCAGCACATAAACCTCACAATGGTAACATCGAATGGTACACAATCCTTCAAGTTGATCGATTGTGTCAAGATATCGATCTTATTAAAAAGAATTATCGAAGATTGGCCCTTTTCCTCCACCCAGATAAGAATTACTTCACTCTAGCCGACTTTGCTTTTAAATTGGTTTCTGATGCATGGGAAGTTTTATCTGATCCAGTTAAGAAAGATAAGTATGATTATGACCTAGTTACTCACTCTCAGCCTCAGGTAGAAAAAGAAGAACCAAAAACTGAACATAAAGATAAATCATTGATTCCTTGGGAAAACAGTAATATTTGGACTGCATGTCCGTACTGTTATTACATGTATGAGTACCCTAGGGTTTATGAGAATTGTTGTTTGAAGTGTCAAAATTGTGAGAAATCATTTCATTGTGTTGCACTTCCTTCACTGCCACCACTTGTGCCTGGAAAAGAGGCTTATTATTGTACATGGGGTTTCTTTCCTATGGGTTTTGTGTTTGGAACTCCTAATTTCAACACAAAAGAACCTTTGAAGATGTTGAACTCTATCGAGTTTCCGAGTTGGACTCCACCTCCACAAGGTCAGCCTCAACCGCTATCACCACCATAG 786 0.3931 MQDESRRAEAERLLGIAEDFLKNRDLNGSRDFAILAQEIEPLVEGSDQVLAIVDVISAAHKPHNGNIEWYTILQVDRLCQDIDLIKKNYRRLALFLHPDKNYFTLADFAFKLVSDAWEVLSDPVKKDKYDYDLVTHSQPQVEKEEPKTEHKDKSLIPWENSNIWTACPYCYYMYEYPRVYENCCLKCQNCEKSFHCVALPSLPPLVPGKEAYYCTWGFFPMGFVFGTPNFNTKEPLKMLNSIEFPSWTPPPQGQPQPLSPP 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1700 261 CDD DnaJ 68 122 IPR001623 -
Lal13g1700 261 Pfam DnaJ domain 68 130 IPR001623 -
Lal13g1700 261 Gene3D DnaJ domain 56 155 IPR036869 -
Lal13g1700 261 ProSiteProfiles dnaJ domain profile. 68 133 IPR001623 -
Lal13g1700 261 ProSitePatterns Nt-dnaJ domain signature. 110 129 IPR018253 -
Lal13g1700 261 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 254 - -
Lal13g1700 261 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 254 - -
Lal13g1700 261 SMART dnaj_3 67 125 IPR001623 -
Lal13g1700 261 PRINTS DnaJ domain signature 70 88 IPR001623 -
Lal13g1700 261 PRINTS DnaJ domain signature 89 104 IPR001623 -
Lal13g1700 261 PRINTS DnaJ domain signature 105 125 IPR001623 -
Lal13g1700 261 SUPERFAMILY Chaperone J-domain 59 133 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1700 Lal-Chr13 16659767 16660552 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1700 7 261 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 50.958 1.42e-87 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1700 - - lang:109344257 336.265