Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1679 ATGGAGGTGAGTGAGAAAGATTACAAGGAATGCAATGCAACTCATCCAACTTTCTTTTCCAACAATGGCAACACTATATTCAAGTTGGACCATTCAGGAACATTCTACTTCATAAGTGGTGCATCAGGGCACTGTGAGAAGGGTCAGAAAATGATTTTAAGGGTCATGGTTCAAGATCAGTATCTTCCTCAACATGCCAAGTCCTTTGGGTATCATGATGCTATTACACCATTTGGTGTCTTTGGAATTCGGTTTAGCCTTCAGGTCTATGGTCGGATTTAA 282 0.4078 MEVSEKDYKECNATHPTFFSNNGNTIFKLDHSGTFYFISGASGHCEKGQKMILRVMVQDQYLPQHAKSFGYHDAITPFGVFGIRFSLQVYGRI 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1679 93 Pfam Plastocyanin-like domain 1 49 IPR003245 GO:0009055
Lal13g1679 93 PANTHER BLUE COPPER PROTEIN 1 58 IPR039391 GO:0009055
Lal13g1679 93 SUPERFAMILY Cupredoxins 2 56 IPR008972 -
Lal13g1679 93 Gene3D - 1 61 IPR008972 -
Lal13g1679 93 ProSiteProfiles Phytocyanin domain profile. 1 57 IPR003245 GO:0009055
Lal13g1679 93 PANTHER EARLY NODULIN-LIKE PROTEIN 21 1 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1679 Lal-Chr13 16516630 16517002 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1679 1 56 Phytocyanin Superfamily AT3G18590 66.071 9.03e-24 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1679 - - lang:109346935 150.214