Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1676 ATGCCAAGCGTGGCCGTGAAACTCTACAGCGTTTTCTTCAAATTCCTCTTTAAGCAACGTTTACATAATCGGATCCAATCACCGATCCATTTACCCGACCCGTTTGGTGTTACTTCTCGACCCGACGAATCCGTCGCTAACTCTAACCCTTCTTTCTCTGACGGCGTCGCTACTAAAGATATCCACATCGATCCTTTCACTTCTCTTTCCATTCGAATATTCCTTCCTGATTCCGTTCTCTCTCTCCCCGAACCTAACCCCAAACCTATCCCCAAACCTAACTCCAGCCTAATCAACGGTTTCGATTCTGAAACGGCGTCGTTGTTGCGGAGAAACAGTTATGGTCCTTCCGTTGCGTTGGAATCGAGGGATGAGGAGGAGATTTCTAGAAGGAACAGCGTTGGTGAGGGTTTGGGTTCGTATAAGGGATATTCTCCGGTGTTGGATAATCGACGGAAGAGATTGCCGGTTATGGTGCAGTTTCACGGTGGTGGTTGGGTGAGTGGGAGTAATGATTCGGTTGCTAATGATTTCTTTTGTAGGCGAATTGCGAAATTGTGTGATGTTATTGTTGTGGCGGTTGGGTATAGGCTTGCGCCGGAAAATAGGTATCCGGCTGCGTTTGAGGATGGGATGAAGGTGTTGAGTTGGTTGGCGAAACAGGCGAATTTGGCCGAGTGTAGTAAGTCGATGGGGGTTAAGAAATTGGATTCACATAATAGACATATTGTTGATACATTTGGTGCTTCAATGGTGGAACCTTGGTTGGCTGCTCATGGAAATTTATCAAGGTGTGTTCTTCTTGGTGTAAGTTGTGGTGCAAATATTGCAGACTATGTGGCTCGAAAAGCTGTAGAAGCAGGCAAACATCTAGACCCTGTCAAGGTGGTGGCACAGGTCCTGATGTATCCATTTTTTGTTGGAAGTGTGCCCACCCGTTCTGAAATAAAGTTGGCAAACTCTTATTTTTATGACAAGGCTATGTGTATGCTAGCTTGGAAACTTTTCCTACCGGAGGAAGAATTTAACCTAGACCACCCAGCTGCTAATCCCCTAGTCCCAGGCCGGGGTCCTCCATTAAAGTTGATGCCTCCAACAATGACAATTGTGGCAGAACATGACTGGATGAGGGATCGCGCAATTGCTTACTCGGAGGAGCTCCGGAAAGTGAATGTTGATGCACCTGTTCTTGAGTACAAGGATGCAGTTCATGAATTCGCAACACTTGACATACTTCTCAAAACCCCTCAGGCTCAGGTCTGTGCTGAGGACATTGCCATTTGGGTCAAGAAATATATCTCACTCCGAGGTCACGAATTCTCATATTGA 1329 0.4635 MPSVAVKLYSVFFKFLFKQRLHNRIQSPIHLPDPFGVTSRPDESVANSNPSFSDGVATKDIHIDPFTSLSIRIFLPDSVLSLPEPNPKPIPKPNSSLINGFDSETASLLRRNSYGPSVALESRDEEEISRRNSVGEGLGSYKGYSPVLDNRRKRLPVMVQFHGGGWVSGSNDSVANDFFCRRIAKLCDVIVVAVGYRLAPENRYPAAFEDGMKVLSWLAKQANLAECSKSMGVKKLDSHNRHIVDTFGASMVEPWLAAHGNLSRCVLLGVSCGANIADYVARKAVEAGKHLDPVKVVAQVLMYPFFVGSVPTRSEIKLANSYFYDKAMCMLAWKLFLPEEEFNLDHPAANPLVPGRGPPLKLMPPTMTIVAEHDWMRDRAIAYSEELRKVNVDAPVLEYKDAVHEFATLDILLKTPQAQVCAEDIAIWVKKYISLRGHEFSY 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1676 442 SUPERFAMILY alpha/beta-Hydrolases 46 433 IPR029058 -
Lal13g1676 442 PANTHER CARBOXYLESTERASE 16-RELATED 21 422 - -
Lal13g1676 442 Gene3D alpha/beta hydrolase 36 436 IPR029058 -
Lal13g1676 442 PANTHER ARYLACETAMIDE DEACETYLASE 21 422 - -
Lal13g1676 442 Pfam alpha/beta hydrolase fold 158 407 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1676 Lal-Chr13 16499003 16505195 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1676 1 442 Carbohydrate Esterase AT3G27320 71.523 0.0 638
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1676 - - gmx:100794631 688.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1676 13 16499003 16505195 Lal13g1676 13 16499003 16505195 ECH
Lal12g1355 12 16663339 16668154 Lal13g1676 13 16499003 16505195 LSH