Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1672 ATGGTAAAGAAGACTTCAAACTTTTTGTGCAAACTCTCAATCATTATTTCTACCATTCTTCTCTTATTCCAACTAACCCATTCCACTAACCATCACCAACCATGTCCACCTTCTTCATGTGGCAAAGTTCATAACATAACTTATCCATTCAAACTCAAAACTGATCCAATCAATTGTGGTGACCCAAGATACGAATTAGAATGCACTAACAACAACTCAACACTATTATTATCTCTCTTCTCAGCAAAAAAATACCATGTTCAACACATCGATTACAACACATACAAAATCATCTTAACCGATCCTGGTGTAGTTGAAGATGCTACTTGCTCTTTCATCCCACGCTATTTCTTATCAGAAACCAGTTTTAAACCTATTTTTGGTCCTGATGATTTTGGTTCAGAACCGTTTACTTTGTACCATATTGATCCATATAGAGTAGCCTACTTCAACTGCACTAATCCGGTTATTACTAACGATGCTTATGGTCCAAAATATGTTAAAGTTGATACGAGTAATTGCACTGAGTATGGAACAAATGGACATGTTTATGCTGTTATGGAAACAAGGTTGTTTGGTTATAGCGTGAGTGATATTAGGGTTGGGTGCAGTCTTATGGTGGCTACGTTGACGGGTACGAGGTTGTCGGAGATTGGAAACGGCAACGTTTCGTATGATGAGATAAGAAGAGTGGTGGGTGAAGGGTTTGTGGTTTCATGGTTACCAATTGTTTGTGAGGATGAATGTGGAAAAGGGGTTGATTGTGAAGTTGTTGATGAAATAAGTGGACAAGTCAAATGTGACAAGCGTTATTGTCATTATGCCTATCATACAACTCGTAAATGTGGAATTTTATATCAGATCATTGGTTATACTACAGCTTATCTCAGAGGCATTGTAATTGGAATATACAGTAGAATATCATTTAGCACCAGATTATTGGACAACCCTGTTGGTCTACAATATTTTGATGGAGGAGTATATATAGGAAGAAATATTATATCATCTTTATTTGCAATCAGAATTTTGTTTGGTGTTGCATTTCTTATTCTCTTATTGATTTATAAATGGCGAAGAAGACATTTATCAATATATGAAGGCATTGAAAGTTTTCTTCTAGACAACAACTTTAATCCCATAAGGTATGATTACAAAGAAATCAAGAAAATGAGTGGTGGTTTCAAAGTTAAATTGGGCCAAGGAGGTTTTGGTTCTGTGTACAAAGGAAAACTACGTAGTGGGGTTGATGTAGCAATAAAAATGTTGAGTAAATTCAACCCTAATGGACAAGACTTCATCAATGAAGTAGCTACAATCGGAAGAATACATCATGTTAATGTGGTACATCTTGTTGGGTATTGTGTTGATGGTAAAAAACGTGCCCTTGTCTATGATTTTATGCCTAATGGGTCATTGGATAAATATATATTCTCTAAAGAAGAAAGTAGTGTACATTTGAGTTATGCAAAAATATATGAAATATCTCTAGGAATAGCTCATGGTATTGAATATCTACATCAAGGTTGTGATATGCAAATTCTACATTTTGATATCAAGCCTCATAATATTCTTCTAGATGAAAACTTCATCCCAAAAGTTTCAGATTTTGGACTTGCAAGACTATATCCTCTAGATTGTAGCATTGCTCCTTTAACTGTAGCAAGAGGAACTTTAGGTTACATGGCTCCAGAATTGTTCTATAACAACATTGGAGGACTATCTTATAAGGTTGATGTGTATAGTTTTGGAATGTTGTTGATGGAAATGACAAGTAAGAGGAAGAACTCAAATCCACATGCAGAACATTCAAGCCAAACTTACTTCCCCTTTTGGATACATGATCAATTTCTTGAGGAAAAAGATATCGAAATCGAAAACGGCTCGGATGAGGATAATGGTGTAGCTAAAAAAATGTTCATTGTTGCTCTTTGGTGTATTCAATTGAAACCAAGTGATCGCCCTTCAATGAGCAAGGTAGTTGAGATGCTTGAAGGAAAAATTGAAAGCCTTGAAATACCTCCAAGGCCTTCATACTATCCACAAGAAAGGTTTCAACATGATGAAGATGATTTCATCTCTCACCAAACATCATGGAGTGATTCCTCAAGTTTTGATCATCATCATGGCCAAATCATAACTACTCATCAAGAGAATAGTGTTAGAGAAATAGAGACATAG 2178 0.3558 MVKKTSNFLCKLSIIISTILLLFQLTHSTNHHQPCPPSSCGKVHNITYPFKLKTDPINCGDPRYELECTNNNSTLLLSLFSAKKYHVQHIDYNTYKIILTDPGVVEDATCSFIPRYFLSETSFKPIFGPDDFGSEPFTLYHIDPYRVAYFNCTNPVITNDAYGPKYVKVDTSNCTEYGTNGHVYAVMETRLFGYSVSDIRVGCSLMVATLTGTRLSEIGNGNVSYDEIRRVVGEGFVVSWLPIVCEDECGKGVDCEVVDEISGQVKCDKRYCHYAYHTTRKCGILYQIIGYTTAYLRGIVIGIYSRISFSTRLLDNPVGLQYFDGGVYIGRNIISSLFAIRILFGVAFLILLLIYKWRRRHLSIYEGIESFLLDNNFNPIRYDYKEIKKMSGGFKVKLGQGGFGSVYKGKLRSGVDVAIKMLSKFNPNGQDFINEVATIGRIHHVNVVHLVGYCVDGKKRALVYDFMPNGSLDKYIFSKEESSVHLSYAKIYEISLGIAHGIEYLHQGCDMQILHFDIKPHNILLDENFIPKVSDFGLARLYPLDCSIAPLTVARGTLGYMAPELFYNNIGGLSYKVDVYSFGMLLMEMTSKRKNSNPHAEHSSQTYFPFWIHDQFLEEKDIEIENGSDEDNGVAKKMFIVALWCIQLKPSDRPSMSKVVEMLEGKIESLEIPPRPSYYPQERFQHDEDDFISHQTSWSDSSSFDHHHGQIITTHQENSVREIET 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1672 725 Gene3D Transferase(Phosphotransferase) domain 1 467 671 - -
Lal13g1672 725 PANTHER RUST RESISTANCE KINASE LR10-RELATED 13 695 IPR045874 GO:0004672
Lal13g1672 725 SMART serkin_6 392 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g1672 725 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 13 695 - -
Lal13g1672 725 ProSitePatterns Serine/Threonine protein kinases active-site signature. 513 525 IPR008271 GO:0004672|GO:0006468
Lal13g1672 725 MobiDBLite consensus disorder prediction 695 718 - -
Lal13g1672 725 Gene3D Phosphorylase Kinase; domain 1 373 466 - -
Lal13g1672 725 ProSiteProfiles Protein kinase domain profile. 392 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g1672 725 Pfam Protein kinase domain 396 661 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal13g1672 725 MobiDBLite consensus disorder prediction 695 725 - -
Lal13g1672 725 ProSitePatterns Protein kinases ATP-binding region signature. 398 420 IPR017441 GO:0005524
Lal13g1672 725 Pfam Wall-associated receptor kinase galacturonan-binding 35 101 IPR025287 GO:0030247
Lal13g1672 725 SUPERFAMILY Protein kinase-like (PK-like) 378 664 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1672 Lal-Chr13 16473893 16477453 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1672 15 677 Receptor kinase-like Gene Family AT5G38260 32.656 1.15e-99 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Lal13g1672 Pkinase 2.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1672 - - gmx:100820366 927.161