Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1664 ATGAAATCTTTCTCCACAATTCAATCACCCCACCTTTTCTCTTTCACAAGATTTTACACTTTCATCACCTTTAGGACTAGACTTACTTTTCCTGCAAAGCTCTTCTTTTGCCAGGCAAAATCTGTAAGTTTCCACTCAGGCACAGATGGGTCGTTAAACATAAAAGTGGTTCCTACGACTCTGTTAGCAGCAGAAAAGGAAGAAGCCAGGGCTGTGTTGACCTTGTTTTTCAAGAAACTGGGCTTGAGCACTGCAATTGCAGCAAGAATCATCAACAAGGCAGATCTATTTATTGATCACCTTCTCTCTAAGCTTCATCATAAACACAAATCTCGGTACCTCGTAGGGAGAGAGCTTACAACTCTTGAGATCAGGGATGCTCTTAATACTTTTCTCGATTCACTTCTTGAAGAGCACGGAAACAATCTAGTGCGTGTAGTGGAATACTATCCAGACCCACCTGCTATGGAAAATTCAACTGTTCTGCCGATCCCTCCTCCGAGTCCAACTTTGAAGTCTAAGAAGCATAAAGCTGTGTCTCGAGTGAGTGAGATAGATCCGTTTGCTGGCAAGCTTCGCCCTCATATTGCTTATCTTATGGAGCTTGGTATGGATATTGAGCAGATCAGAACTATTGTACGACGATTCCCATCTTTTGTTTACTATAGCTTGGAGGGCAAAATTAAGCCAGTGGTTGAGTTTTTCCTTGAGCTAGGAATACCGAAAGAAGACATCCCCACCATCCTCGCCAAAAGGCCTCAACTATGCGGAATCAGTCTATCCGAAAACCTTAAACCCACCATGAAGTTCTTAGAATCTTTAGGTGTTGACAAGAAGCAATGGGCAAAGGTCATCTACCGCTTCCCAGCCCTTCTCACTTATAGCAGGCAGAAGTTGAAGGAAAGCGTAGATTTCCTCCAAGAAATCGGCATCTCAGATGAGAGCATAGGTAAAATTTTAACTCGGTGCCCCAATATTGTTAGTTATAGTGTAGAGGACAATCTCCGGCCTACAGCTAAGTACTTCCGTTCTTTGGGGGTTGATGTTGGCATTCTTCTATTCCGATGCCCACAGAATTTCGGTCTTAGCATTGAGGCTAATCTAAAGCCTGTCACGGAATTTTTCTTGGACAGGGGATACACTGTAGAGGAAATCGGAACCATGATTTCAAGATTTGGAGCCTTGTATACTTTTAGCTTGACCGAGAATTTGATTCCAAAATGGGATTTCTTTATGACCATGGATTATCCAATGTCTGAGCTGGTTAAATTCCCTCAATTTTTCGGGTACAGTTTAGAAGAACGGATTAAACCACGATATGCACGCATGAAAGAATCGGGCGTGAAGTTGCTGCTGAACCAGGTTTTGTCACTGTCAAGCAGCAACTTCGATAAGGTATTGAACAAGAAAATGGAGAAAATGCAAGTTAATCAGGATTCTAGTTTTATCACCAAAACTATTCAACAAGAAAATGAAAATTGA 1482 0.4197 MKSFSTIQSPHLFSFTRFYTFITFRTRLTFPAKLFFCQAKSVSFHSGTDGSLNIKVVPTTLLAAEKEEARAVLTLFFKKLGLSTAIAARIINKADLFIDHLLSKLHHKHKSRYLVGRELTTLEIRDALNTFLDSLLEEHGNNLVRVVEYYPDPPAMENSTVLPIPPPSPTLKSKKHKAVSRVSEIDPFAGKLRPHIAYLMELGMDIEQIRTIVRRFPSFVYYSLEGKIKPVVEFFLELGIPKEDIPTILAKRPQLCGISLSENLKPTMKFLESLGVDKKQWAKVIYRFPALLTYSRQKLKESVDFLQEIGISDESIGKILTRCPNIVSYSVEDNLRPTAKYFRSLGVDVGILLFRCPQNFGLSIEANLKPVTEFFLDRGYTVEEIGTMISRFGALYTFSLTENLIPKWDFFMTMDYPMSELVKFPQFFGYSLEERIKPRYARMKESGVKLLLNQVLSLSSSNFDKVLNKKMEKMQVNQDSSFITKTIQQENEN 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1664 493 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF5, CHLOROPLASTIC 24 477 - -
Lal13g1664 493 PANTHER CGI-12 PROTEIN-RELATED 24 477 IPR003690 GO:0003690|GO:0006355
Lal13g1664 493 Pfam mTERF 193 376 IPR003690 GO:0003690|GO:0006355
Lal13g1664 493 Pfam mTERF 192 307 IPR003690 GO:0003690|GO:0006355
Lal13g1664 493 Pfam mTERF 298 463 IPR003690 GO:0003690|GO:0006355
Lal13g1664 493 Gene3D Transcription termination factor 3, mitochondrial 251 476 IPR038538 -
Lal13g1664 493 SMART mt_12 350 381 IPR003690 GO:0003690|GO:0006355
Lal13g1664 493 SMART mt_12 418 449 IPR003690 GO:0003690|GO:0006355
Lal13g1664 493 SMART mt_12 386 417 IPR003690 GO:0003690|GO:0006355
Lal13g1664 493 SMART mt_12 317 348 IPR003690 GO:0003690|GO:0006355
Lal13g1664 493 SMART mt_12 246 277 IPR003690 GO:0003690|GO:0006355
Lal13g1664 493 SMART mt_12 282 312 IPR003690 GO:0003690|GO:0006355
Lal13g1664 493 SMART mt_12 210 241 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1664 Lal-Chr13 16406639 16409866 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lal13g1664 mTERF 2.2e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1664 K15032 K12177 gmx:100781900 716.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1664 13 16406639 16409866 Lal13g1664 13 16406639 16409866 ECH