Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1658 ATGGGGCTAAAGAACACAATTATGTTGGTATTGGTAGCTACCTTAATGGTAAAGGAGGCATTGGCAACACAACATGTAGTTGGTGGAACCCAAGGTTGGGATCAATCCACAGACTTTAACTCATGGACTTCTGGTCAAACATTTAAAGTTGGAGATAAACTTGTTTTCAAGTACTCTTCAATGCATAATGTTGTTGAACTAGGTGGGGAAAGTGATTATAAGACTTGTAATATTAACAATCCAGTGAACACTATGAGCAGTGGCAATGATGTAGTGAAATTGGATAAGCCAGGACCAAGGTACTTCACATGTGGTACCTTAGGCCATTGTAGTCAAGGCATGAAGATGAAAATTACCATAGCGAATGAGGGTACACCTTCTTCCACTACATCGTCACCATCATCATCATCCTCATCGTCATCTTCTTCGCCGACTTCGACTTCTACGGCTTCACTTTCACAAAGTTTTGCCTATATTGTGTTCATTTTTGCCTTAGCAGTTAACATGTTTCAATTGATGATATGA 525 0.3962 MGLKNTIMLVLVATLMVKEALATQHVVGGTQGWDQSTDFNSWTSGQTFKVGDKLVFKYSSMHNVVELGGESDYKTCNINNPVNTMSSGNDVVKLDKPGPRYFTCGTLGHCSQGMKMKITIANEGTPSSTTSSPSSSSSSSSSSPTSTSTASLSQSFAYIVFIFALAVNMFQLMI 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1658 174 PANTHER BNAA06G32330D PROTEIN 7 137 - -
Lal13g1658 174 Pfam Plastocyanin-like domain 34 114 IPR003245 GO:0009055
Lal13g1658 174 Gene3D - 21 126 IPR008972 -
Lal13g1658 174 ProSiteProfiles Phytocyanin domain profile. 23 122 IPR003245 GO:0009055
Lal13g1658 174 SUPERFAMILY Cupredoxins 22 120 IPR008972 -
Lal13g1658 174 MobiDBLite consensus disorder prediction 122 145 - -
Lal13g1658 174 CDD Phytocyanin 23 120 - -
Lal13g1658 174 PANTHER BLUE COPPER PROTEIN 7 137 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1658 Lal-Chr13 16348070 16349761 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1658 7 170 Miscellaneous Gene Families AT3G27200 50.610 2.30e-54 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1658 - - ahf:112785045 214.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1658 13 16348070 16349761 Lal13g1658 13 16348070 16349761 ECH
Lal13g1658 13 16348070 16349761 Lal24g1325 24 14576010 14580732 LSH