Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1657 ATGAATGAATCAATGGATGCATCATCACTTCCTCACTTCGATTCTCTCATTCATTCTTCTTCTTCTTCTTCTTCAATTTCAAGTCCTTCTTCTCCACATCTTCTTCAACCTCGTTTTCCTTCTTCTCCACTCAATTCCTCAACCTTAAATCCCAATCAACCCTTCGTTATAGGTGTTTCTGGAGGTACTGCTTCTGGTAAGACCACTGTTTGTGATATGATCATTCAACAGCTTCATGATCACCGCGTTGTCCTCGTTAATCAAGATTCGTTTTATCGTGGGTTGACACCTGAAGAGTTGGAGCATGCGCACGAGTACAATTTTGACCATCCCGATGCTTTTGATACTGAGCAACTATTAGAGTGCATGGGAAAGCTCATAAGTGGTCAAAGTGTTCAACTCCCAATTTACGACTTTAAGAAGCACCAACGCTCGACAGATAGCTTCCGGCAGGTCAATGCCTCTGATGTCATTATATTGGAGGGGATTCTTGTTTTCCATGATCAAGATGTCCGGGATTTGATGAACATGAAAATCTTTGTTGACACAGATGCTGATGTGAGGCTTGCTCGTAGAATTAGACGTGACACGGTGGAGAGGGGCAGGGATATAAACTCTGTTCTTGAACAGTATGCAAAGTTTGTTAAGCCTGCCTTTGACGATTTTATTCTTCCATCAAAGAAGTATGCTGATGTGATCATTCCCAGAGGAGGTGATAATCATGTTGCCGTTGATCTGATCGTTCAACATATTCACACAAAACTTGGGCAACATGATCTATGCAAGATATATCCAAATGTGTATGTTATTCAGTCAACATTTCAGATAAGGGGCATGCACACATTGATTCGTGACCAAGACTTATCAAAGCATGATTTTGTATTTTATTCAGATCGGCTTATACGTCTGGTTGTTGAGCATGGCCTTGGTCATCTGCCATTCACTGAAAAGCAAGTAGTTACTCCGACAGGATCCGTCTACACTGGCGTTGACTTCTGCAAGAAATTGTGCGGTGTTTCAATTATTCGAAGTGGTGAGAGCATGGAAAATGCACTTCGAGCTTGTTGTAAAAGCATTAAGATTGGAAAAATTCTGATTCATCGGGACGGTGACAATGGAAAACAGCTTATATATGAGAAGCTTCCCAAGGATATTTCAGAACGACATGTCTTGCTTCTTGACCCTGTCCTGGCCACAGGTAACTCTGCCAACCAAGCAATTGAGTTACTCGTTCAGAAAGGAGTTCCCGAATCACACATTATATTCCTGAATCTTATATCTGCTCCCGAGGGAATCCATTGCGTGTGTAAGAAGTTTCCATCTTTGAAAATTGTCACATCTGAGATTGATCACGCATTAAATGAAGAGTTTCGGGTTATCCCAGGATTGGGTGAGTTTGGTGATCGCTACTTTGGTACTGATGATTGA 1428 0.4167 MNESMDASSLPHFDSLIHSSSSSSSISSPSSPHLLQPRFPSSPLNSSTLNPNQPFVIGVSGGTASGKTTVCDMIIQQLHDHRVVLVNQDSFYRGLTPEELEHAHEYNFDHPDAFDTEQLLECMGKLISGQSVQLPIYDFKKHQRSTDSFRQVNASDVIILEGILVFHDQDVRDLMNMKIFVDTDADVRLARRIRRDTVERGRDINSVLEQYAKFVKPAFDDFILPSKKYADVIIPRGGDNHVAVDLIVQHIHTKLGQHDLCKIYPNVYVIQSTFQIRGMHTLIRDQDLSKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVVTPTGSVYTGVDFCKKLCGVSIIRSGESMENALRACCKSIKIGKILIHRDGDNGKQLIYEKLPKDISERHVLLLDPVLATGNSANQAIELLVQKGVPESHIIFLNLISAPEGIHCVCKKFPSLKIVTSEIDHALNEEFRVIPGLGEFGDRYFGTDD 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1657 475 Gene3D - 258 473 IPR029057 -
Lal13g1657 475 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 42 247 IPR027417 -
Lal13g1657 475 CDD UMPK 56 254 IPR000764 -
Lal13g1657 475 Pfam Uracil phosphoribosyltransferase 272 473 - -
Lal13g1657 475 PRINTS Uridine kinase signature 54 71 - -
Lal13g1657 475 PRINTS Uridine kinase signature 84 95 - -
Lal13g1657 475 PRINTS Uridine kinase signature 129 144 - -
Lal13g1657 475 PRINTS Uridine kinase signature 186 196 - -
Lal13g1657 475 PRINTS Uridine kinase signature 200 211 - -
Lal13g1657 475 PRINTS Uridine kinase signature 222 235 - -
Lal13g1657 475 CDD PRTases_typeI 331 446 IPR000836 -
Lal13g1657 475 PANTHER URIDINE KINASE-LIKE PROTEIN 2, CHLOROPLASTIC 10 472 IPR029930 GO:0004849|GO:0044206
Lal13g1657 475 Gene3D - 50 257 IPR027417 -
Lal13g1657 475 SUPERFAMILY PRTase-like 257 474 IPR029057 -
Lal13g1657 475 MobiDBLite consensus disorder prediction 21 47 - -
Lal13g1657 475 TIGRFAM udk: uridine kinase 54 254 IPR000764 -
Lal13g1657 475 PANTHER URIDINE KINASE 10 472 - -
Lal13g1657 475 Pfam Phosphoribulokinase / Uridine kinase family 56 242 IPR006083 GO:0005524|GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1657 Lal-Chr13 16338270 16346733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1657 51 475 PRT Gene Family AT5G40870 90.824 0.0 806
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1657 K00876 - gmx:100786137 822.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1657 13 16338270 16346733 Lal13g1657 13 16338270 16346733 ECH