Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1655 ATGAGGAATGAAGAACATAGTTATAAGAATGTTGAAGAAAACACAACAATGAATAATCACAACATGGAGGAAGTAGTTGAAGAAAGAGATCCAGAACACAATCCACTGAATGAACCACTACTAATCAAAAGGAACAGAACTCTCTCTGGAAATCCACTTGCTTTGGTTGGTTCAAAAGTTTCTTACATAGAAAGCTTGGACTATGAGATCAATGAGAACGATTTATTCAAGCAAGATTGGAGGAGCAGATCAAGAACTCAAGTGTTGCAATATATATTCTTGAAATGGTTACTTGCATTCTTTGTTGGATTTCTTACTGGTATTATAGCTACTCTCATGAATCTTTCTATTGAGAACATTGCAGGGTACAAGCTTCTTGCTGTTGTTGAATACATCCAAAATGAAAGGTATTTGACAGGTTTTGTTTTCTTCATGGGAATTAATTTGGTTTTGACATTCATTGCTGCTATACTGTGTGTGTGTTTTGCACCCACAGCAGCTGGACCTGGAATACCAGAAATCAAAGCTTATCTTAATGGTATTGATACTCCCAACATGTTTGGTGCCAATGTTTTATTTGTCAAGATAATTGGAAGCATTGGAGCTGTCTCTGCAGGCCTAGATTTAGGAAAAGAAGGGCCATTGGTACATATTGGCAGCTGCATTGCTTCCATACTAGGCCAAGGAGGCCCTGACAATTACCGAATAAAATGGCGATGGCTGCGATATTTCAACAATGATCGCGACCGTCGTGATCTTATTACAAGTGGTGCTTCTTCAGGGGTTTGTGCAGCTTTCAGGGCCCCTGTAGGAGGAGTTCTCTTTGCTCTAGAAGAGGTAGCAACTTGGTGGAGAAGTGCACTTCTTTGGAGAACATTTTTCAGCACAGCTGTTGTGGTTGTAGTGCTAAGGGCCTTCATTGAACTCTGCCATGAAGGGAAATGTGGTCTTTTTGGTGCAGGAGGGCTTATCATGTTTGATGTGAGCAATGTTAGTGTGAGTTACAATGTGATGGATATCATCCCTGTTGTAATCATTGGAGTCATTGGTGGGGTATTAGGAAGCCTTTATAACTATCTTCTCCACAAGGTCCTCCGTCTCTACAATCTCATCAATCAGAAAGGAAAAATGTATAAGCTTATGCTAAGTCTTGCAGTTTCACTCTTCACATCAGTGTGCCAATATGGTCTCCCATTCCTAGGAAATTGCACTCCCTGTGATCCATCACTTCCGGAGTCCGTCTGCCCCACGAACGGACGGTCGGGAAATTACAAACAATTTAACTGCCCAAAAGGCCACTACAATGATCTTGCTACTCTCCTTCTTACCACTAATGATGATGCTGTCAAAAACATATTCTCAACCAACACTCCTCTTGAATACCAACCAACCTCCATCATAATTTTCTTCATACTCTATTGCATATTAGGATTAATCACCTTTGGAATTGCGGTGCCATCTGGTCTCTTCCTTCCAATCATACTTATGGGTTCAGGTTATGGCCGCCTTCTTGGCATCATCATGGGACCTCATACAAACATTGACCATGGATTGTTAGCAGTTCTTGGTGCAGCCTCCCTCATGGCTGGTTCTATGAGGATGACTGTATCCCTTTGTGTGATCTTTCTCGAACTAACGAACAACCTTCTCCTGCTACCAATAACCATGATTGTTCTCCTAATAGCCAAAACTGTTGGAGATAGTTTCAACCCAAGCATCTATGAGATCATACTCCACCTAAAAGGCCTTCCATTCATGGATGCAAATCCTGAGCCATGGATGAGAAATCTTACAGTTGGAGATCTTGTTGATGTAAAGCCACCGGTGGTTACCCTTAGCGGAGTAGAAAAGGTATCCAATATAGTTGATGCCTTGAAAAACACTACACATAATGGTTTCCCTGTGATGGATGATAGGGTAGTACCACCAACAGGAGTGGCTAGTGAGGCAACAGAACTGCATGGGCTGCTTTTAAGAGCACATCTCATCCAAGTGCTAAAGAAGAAGTGGTTCTTGAAAGAGAGAAGGAGAACTGAGGAATGGGAAGTTAGAGAGAAATTTACTTGGATGGAACTTGCTGAGAGAGAAGGGAATATTGAAGAGGTGGCTGTGACAAAACATGAAATGGAGATGTTTGTTGATCTACATCCTCTCACCAATACAACCCCTTTTACAGTGTTAGAGAGCATGTCAGTAGCAAAAGCAGTGATCCTCTTCAGACAAGTAGGACTTCGCCATATGCTCGTCGTACCCAAGTATCAAGTAACTGGGGTATCTCCTGTAATTGGGATCTTGACCAGGCAGGATCTATTGGCACACAACATTCTGTCAGTCTTTCCTCACCTGGCAAAACCTAAGGGCAGAGAAAAGAAAAATTGA 2379 0.4191 MRNEEHSYKNVEENTTMNNHNMEEVVEERDPEHNPLNEPLLIKRNRTLSGNPLALVGSKVSYIESLDYEINENDLFKQDWRSRSRTQVLQYIFLKWLLAFFVGFLTGIIATLMNLSIENIAGYKLLAVVEYIQNERYLTGFVFFMGINLVLTFIAAILCVCFAPTAAGPGIPEIKAYLNGIDTPNMFGANVLFVKIIGSIGAVSAGLDLGKEGPLVHIGSCIASILGQGGPDNYRIKWRWLRYFNNDRDRRDLITSGASSGVCAAFRAPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRAFIELCHEGKCGLFGAGGLIMFDVSNVSVSYNVMDIIPVVIIGVIGGVLGSLYNYLLHKVLRLYNLINQKGKMYKLMLSLAVSLFTSVCQYGLPFLGNCTPCDPSLPESVCPTNGRSGNYKQFNCPKGHYNDLATLLLTTNDDAVKNIFSTNTPLEYQPTSIIIFFILYCILGLITFGIAVPSGLFLPIILMGSGYGRLLGIIMGPHTNIDHGLLAVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMIVLLIAKTVGDSFNPSIYEIILHLKGLPFMDANPEPWMRNLTVGDLVDVKPPVVTLSGVEKVSNIVDALKNTTHNGFPVMDDRVVPPTGVASEATELHGLLLRAHLIQVLKKKWFLKERRRTEEWEVREKFTWMELAEREGNIEEVAVTKHEMEMFVDLHPLTNTTPFTVLESMSVAKAVILFRQVGLRHMLVVPKYQVTGVSPVIGILTRQDLLAHNILSVFPHLAKPKGREKKN 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1655 792 SUPERFAMILY CBS-domain pair 590 772 IPR046342 -
Lal13g1655 792 CDD CBS_pair_voltage-gated_CLC_euk_bac 606 773 - -
Lal13g1655 792 SUPERFAMILY Clc chloride channel 73 588 IPR014743 -
Lal13g1655 792 PRINTS Plant CLC chloride channel signature 69 77 IPR002251 GO:0005247|GO:0006821|GO:0016020
Lal13g1655 792 PRINTS Plant CLC chloride channel signature 280 288 IPR002251 GO:0005247|GO:0006821|GO:0016020
Lal13g1655 792 PRINTS Plant CLC chloride channel signature 294 304 IPR002251 GO:0005247|GO:0006821|GO:0016020
Lal13g1655 792 PRINTS Plant CLC chloride channel signature 312 319 IPR002251 GO:0005247|GO:0006821|GO:0016020
Lal13g1655 792 PRINTS Plant CLC chloride channel signature 437 453 IPR002251 GO:0005247|GO:0006821|GO:0016020
Lal13g1655 792 Pfam Voltage gated chloride channel 152 566 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lal13g1655 792 CDD ClC_6_like 64 586 - -
Lal13g1655 792 PRINTS Chloride channel signature 164 181 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lal13g1655 792 PRINTS Chloride channel signature 195 214 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lal13g1655 792 PRINTS Chloride channel signature 259 278 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lal13g1655 792 PRINTS Chloride channel signature 485 505 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lal13g1655 792 PRINTS Chloride channel signature 517 533 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lal13g1655 792 PRINTS Chloride channel signature 535 554 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lal13g1655 792 PRINTS Chloride channel signature 573 587 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Lal13g1655 792 Pfam CBS domain 721 771 IPR000644 -
Lal13g1655 792 Gene3D Clc chloride channel 87 588 - -
Lal13g1655 792 Gene3D - 589 778 IPR046342 -
Lal13g1655 792 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 11 787 - -
Lal13g1655 792 ProSiteProfiles CBS domain profile. 719 784 IPR000644 -
Lal13g1655 792 SMART cbs_1 608 667 IPR000644 -
Lal13g1655 792 SMART cbs_1 722 775 IPR000644 -
Lal13g1655 792 PANTHER CHLORIDE CHANNEL PROTEIN 11 787 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1655 Lal-Chr13 16333132 16339998 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1655 11 787 Ion Channels AT3G27170 76.705 0.0 1227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1655 K05016 - gmx:778094 1340.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1655 13 16333132 16339998 Lal13g1655 13 16333132 16339998 ECH