Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1629 ATGGAAGATCAGGGTCAGGGACCCAATAGTCCAAGCCAAGGTTCTGAGAAAAGTGAACCTGTAAGGTCAAGATGGACTCCTAAGCCAGAACAAATCCTCATACTTGAGTCCATCTTCAACAGTGGCATGGTGAATCCACCAAAAGATGAAACTGTTAGAATAAGAAAACTTCTTGAGAAGTTTGGTGCTGTTGGTGATGCTAATGTCTTCTACTGGTTCCAGAACCGCCGCTCCCGGTCACGCCGCCGCCAACGGCAGATGCAGGCTAACCTTGAACAAAGGAATAACCAGCTGCAGGCTCAAGTTGGCGGTGGTGCAAATCCATATCATCATCATCAAGTTTCTTCTCCTATGGATTTTGGTGGTTCATCTTCTTCTTTCATTGGTTCCTCTCCATCTTATCTCTCTGGTTCCTCTTCATCATGTGGTGGCCAAGGAGGATTTGGTGGCTTCTTCTCAGCCTCTTCTCAAATGGGATTTTCTGAAATTGATCATAGTTCAGCTGCACCATCAGTTTTGTATACTTCTTCGGATGCTGCAAATTTGAACTACCAATCTGGATTTGGGGGGACAAATATTTCAGCAGTAATCACTGTTTTTATCAATGGGGTTGCAACAGAAGTTCCAAGTGGACCATTTGACATAAAAACTGTGTTTGGTGAAGATGTTATGTTAGTTCATTCTTCAGGAGTGTCAGTTCCAACCAATGAATTTGGTCTCTTGATGCAGAGCTTGAGCCATGGTGAAAGCTACTTTCTGGTTTCAAAGCAAGCTCAAGTATGA 783 0.4368 MEDQGQGPNSPSQGSEKSEPVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGAVGDANVFYWFQNRRSRSRRRQRQMQANLEQRNNQLQAQVGGGANPYHHHQVSSPMDFGGSSSSFIGSSPSYLSGSSSSCGGQGGFGGFFSASSQMGFSEIDHSSAAPSVLYTSSDAANLNYQSGFGGTNISAVITVFINGVATEVPSGPFDIKTVFGEDVMLVHSSGVSVPTNEFGLLMQSLSHGESYFLVSKQAQV 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1629 260 Coils Coil 81 101 - -
Lal13g1629 260 PANTHER WUSCHEL-RELATED HOMEOBOX 11 2 257 - -
Lal13g1629 260 ProSiteProfiles 'Homeobox' domain profile. 18 83 IPR001356 GO:0003677
Lal13g1629 260 MobiDBLite consensus disorder prediction 1 20 - -
Lal13g1629 260 MobiDBLite consensus disorder prediction 1 27 - -
Lal13g1629 260 SMART HOX_1 20 87 IPR001356 GO:0003677
Lal13g1629 260 SUPERFAMILY Homeodomain-like 15 89 IPR009057 -
Lal13g1629 260 Pfam Homeodomain 22 82 IPR001356 GO:0003677
Lal13g1629 260 Gene3D - 7 100 - -
Lal13g1629 260 PANTHER WUSCHEL-RELATED HOMEOBOX 11 2 257 IPR044558 GO:0003700|GO:0048830
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1629 Lal-Chr13 16061408 16064363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1629 3 260 Wox Gene Family AT3G03660 48.571 4.53e-71 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lal13g1629 Homeodomain 1e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1629 - - lang:109335690 423.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g1629 13 16061408 16064363 Lal13g1629 13 16061408 16064363 ECH