Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1616 ATGGCTACCAAAGTTTCTATATCCAAACATAAGTTCTACACTTTGTTCTTGAACATCTTGTTCCTTCTTCTGAGCTTTTCTTTCATGATTATTCATTTCCACTCACCAGAACCAGAAGTTGTGGTTATGAACAATCACTATCCCTTTAATGGAAATAGTGAAAATGACTGCAAAAGCTTTCACAACCTTGATGATTACAAAGCCAAGTGCTTTTACCTTAAATCCAATGACCCTTGTGACTCTCAGGGTTATATTGATTACCTTTACATTTTCTATTGCAAATTTGGGAAATTCCCTCTATTGGGTCATAGTTTTCTTTTCCTTTGGCTCCTTGTTTTGTTCTATCTTTTGGCAAATACAACTTCTGTTTATTTTTGTTCTTCCCTTGAAAACTTGTCCAAATTACTTAGGTTGTCCCCTACAATTGCTGGAGTTACCCTTCTCTCTCTTGGAAATGGTGCACCTGATGTTTTTTCAAGCCTTGTCTCTTTCCAAGGTAATGGAACCCAAAGCATTGGTTTCAATACAGTGCTTGGTGGTGTTTCTTTTGTGACATGTGTTGTTGTGGGATTAGTGAGCATTTCAATAAGACAAAGGGGTGTTCATGTTATGAAGTCTGCTTTTATTAGAGACATTTGTTTCCTTCTTTTGGTTCTTCTTTGCTTGTTTAGTATTTTGATCAATGGTGAAATCAATCTTCATGGAGCAATTGGTTTTTCTTTGTTGTATGTGGTGTATGTAGTTGTTGTTTATGTTTCATCTAACAAATGGAAGTGCATCAATTACGATGATGATGACGACGATAACGACGATGATGCCGAAAAGGGTTGTAGTTCAAGTCATGGTAGTAACCATGACTTGAGTGTTCCTCTTTTTATTGGTATGGAGAAAGGAATGGTTGATTCTATAGAAAATGGAGCTGAAGATGAAGAACATGACTTGAATATAAAAGATAGATGTTGTTGTTTGAGATCTTCAATATGTGAAATGTTCCTCTATGTCCTTGAAATGCCACTTTACTTGCCAAGAAGATTAACAATTCCAGTTATTTGTGAAGAAAGATGGTCAAAACCATATGCAATTTCTTCAGTGATACTAGCACCAATTCTCTTATCTATACTTTGGGCCCCTCACAATAAGAACAATTTCTCCAACACAAACCTTATAATCTATGGAATTGGACTTTTAGTTGGAACTATATTTGGTATAATTGCATTTTTCACTACTGAAACTTCAATGCCACCAAAGAAGTTCTTATTTCCTTGGCATGCAGGAGGGTTCATAATGAGTGTAACATGGAGCTACATTTCAGCTCAAGAGTTGGTTGGATTGCTTGTTTCAATAGGGTACATAAGTGGAATAAGTCCTTCAATATTGGGTCTAACAGTCCTTGCTTGGGGTAATTCACTTGGTGATTTGATGACAAATTTAACCATGTCCTTAAATGGTGGGTCAGAAGGGACTCAAATAGCTATATCTGGTTGCTATGCTGGCCCTATCTTCAATACTGTGGTTGGTTTGGGTTTGTCTCTTATATGCACTACTTGGTCAAAGTATCCACAATCTGTTATGATCCCTAGAGATTCATATCTTTTGGAAACAATGGCATTATTGGTGGTTGGATTAGTATGGGCACTCATTGTTTTGATAAGAAGAGATATGAAGCTTGATGGGGTATTAGGGGTAGGACTTTTAGTTGTTTACTCCATTTCTTTGTCTATAAGGCTAATTCAAACACAAGGGTCTCTTGGTTCTTAG 1758 0.3658 MATKVSISKHKFYTLFLNILFLLLSFSFMIIHFHSPEPEVVVMNNHYPFNGNSENDCKSFHNLDDYKAKCFYLKSNDPCDSQGYIDYLYIFYCKFGKFPLLGHSFLFLWLLVLFYLLANTTSVYFCSSLENLSKLLRLSPTIAGVTLLSLGNGAPDVFSSLVSFQGNGTQSIGFNTVLGGVSFVTCVVVGLVSISIRQRGVHVMKSAFIRDICFLLLVLLCLFSILINGEINLHGAIGFSLLYVVYVVVVYVSSNKWKCINYDDDDDDNDDDAEKGCSSSHGSNHDLSVPLFIGMEKGMVDSIENGAEDEEHDLNIKDRCCCLRSSICEMFLYVLEMPLYLPRRLTIPVICEERWSKPYAISSVILAPILLSILWAPHNKNNFSNTNLIIYGIGLLVGTIFGIIAFFTTETSMPPKKFLFPWHAGGFIMSVTWSYISAQELVGLLVSIGYISGISPSILGLTVLAWGNSLGDLMTNLTMSLNGGSEGTQIAISGCYAGPIFNTVVGLGLSLICTTWSKYPQSVMIPRDSYLLETMALLVVGLVWALIVLIRRDMKLDGVLGVGLLVVYSISLSIRLIQTQGSLGS 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1616 585 PANTHER CATION CALCIUM EXCHANGER 1 583 - -
Lal13g1616 585 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 1 583 - -
Lal13g1616 585 Gene3D - 138 261 IPR044880 -
Lal13g1616 585 Gene3D - 359 576 IPR044880 -
Lal13g1616 585 Pfam Sodium/calcium exchanger protein 423 575 IPR004837 GO:0016021|GO:0055085
Lal13g1616 585 Pfam Sodium/calcium exchanger protein 107 251 IPR004837 GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1616 Lal-Chr13 15952211 15953968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1616 6 581 Antiporters AT5G17850 51.038 5.09e-171 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1616 K13754 - gmx:100813848 722.235