Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1614 ATGGTTGAACGAAAAGAGTGCAACTTGAATGAGCCTCTACTCCTTCAATGCGCATATCTCATTCTCCCATATCTAAATCCACCAGAACTCGCTAATGTCTCTATCACAAGCAAACCCTTCTACAAAATCGCAACCTCCATCACTCTCCTTCGAACTTCCGATGCTTCTAGAACCTTCGAGAACCTTCCAATCCCATTCCTCAATACCACACTCGATAACCACCCCTACGCTTACTTCCTCTACACCCCTTCCCTAACCCTCGATTCCAATCTCCTCCGTCAGGTTTGGGGAGGCACTTTGGTAATTTCTCGTCCGAGTCGGGCGGTTTTGGAATCGGTGAGTGTGGTGGACGAGTTCGGGAGGAAGGTGTCGGGTTGCGAGTGCGAGGATTGTGGAGGTTTGGGTTTAGGTTCGGAGTGTGCTTGTTTGGGTTTGAATGGGTTGGGTGAGTTGGGGAGTGAGTGTGGACCGGGTTGTTTGTGTGGACCGGAGTGTGTGAACCGGTTTACACAGAACGGGGTTGCGGTTCGGGTTAAGATTGTGAGGGATAGGAGGAAAGGGTGGTGTTTGTATGCTGACCAGTTCATAATGAAAGGCCAATTTTTGTTTGAATATGCAGGTGAACTCTTGACAACCAAGGAAGCACAAAGGAGACATCAATACTATGATGAGTGTAGATCACATGGTTGTTTTTCTTCTGCCCTTTTGGTCGTAAGGGAGCATCTTCCATCTGGTAAGGCTTGCTTGAGATTGAACATTGATGCCACAAGAATAGGAAATGTTGCACGATTTGTTAATCATTCATGTGATGGTGGTAATTTAAGCACAAAGCTAGTTAGAAGTTCAGGAGTTTTGTTTCCCCGCCTTTGCTTCTATGCTTTGAAAGATATCCAAGAAGATGAGGAGCTTACTTTTAGCTATGGAGAAATCAGGAAAAAGGCCGATGGTTTGCCATGCTTTTGCAACAGCTCTTCTTGCTTTGGAATATTGCCCTCAGAAGACACTTAA 1008 0.4593 MVERKECNLNEPLLLQCAYLILPYLNPPELANVSITSKPFYKIATSITLLRTSDASRTFENLPIPFLNTTLDNHPYAYFLYTPSLTLDSNLLRQVWGGTLVISRPSRAVLESVSVVDEFGRKVSGCECEDCGGLGLGSECACLGLNGLGELGSECGPGCLCGPECVNRFTQNGVAVRVKIVRDRRKGWCLYADQFIMKGQFLFEYAGELLTTKEAQRRHQYYDECRSHGCFSSALLVVREHLPSGKACLRLNIDATRIGNVARFVNHSCDGGNLSTKLVRSSGVLFPRLCFYALKDIQEDEELTFSYGEIRKKADGLPCFCNSSSCFGILPSEDT 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1614 335 ProSiteProfiles Post-SET domain profile. 315 331 IPR003616 -
Lal13g1614 335 Pfam SET domain 187 308 IPR001214 GO:0005515
Lal13g1614 335 Gene3D SET domain 36 316 IPR046341 -
Lal13g1614 335 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 11 324 - -
Lal13g1614 335 SMART set_7 176 314 IPR001214 GO:0005515
Lal13g1614 335 ProSiteProfiles SET domain profile. 176 308 IPR001214 GO:0005515
Lal13g1614 335 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 11 324 - -
Lal13g1614 335 SUPERFAMILY SET domain 61 328 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1614 Lal-Chr13 15932707 15937215 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1614 154 330 C2H2 Transcription Factor Family AT2G23740 33.696 2.29e-22 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lal13g1614 SET 1.3e-16 No_clan