Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal13g1613 ATGGGTGATCAGCCACAAGGTGGTTACGGCACTTCTGGAACTAGGCGCAAAGGTGCTGCTTTGAGGCGTGCCGTGGCAGCAGAGGGGCAAGAGACGGTGGTGGTATCACCATGTGGTGCTTGCAAGTTCCTGAGGAGGAAGTGCATTGCTGGTTGCATCTTTGCACCATACTTTGGTTCAGACCAGGGTGCAGCCAGGTTCGCAGCTGTGCACAAGGTGTTCGGTGCTAGCAATGTGTCGAAGCTATTGTCGAATATTCCTGAGAGCCACCGCCAGGAAGCAGTCGCGACTGTTTCATATGAGGCTCAGGCAAGGCTGGCTGACCCAGTTTATGGTTGTGTGTCTTCCATTTTTGCTTTGCAGCAACAGGTGGCATCTTTGCAAGCCGAGGTTGCAATGACACAAACTCAGCTGACAAATAGCAGGTATGCATATGCAACTACTTTTCAGACACAACATCAGCAACTACAGCAGCCAAACATGAATTTAACAATGCAGCCAGCATACTCCAACAATTCATCTGCTTCCACCAATTTTATGAACATGGGCAACTTCAACCCTGGTTTTGACCTTGCAATGGGGACAGCACCCTCATCACATAGCTTAGACCCTCTTCATCTCTCTCAGATGTCCCACTATGAGGAAGAGGATGAAGAAGAAAGTAAGATTCCACAGATCTTCAACCAAGACATTGGGCCTCACAGCCGTTGA 711 0.4937 MGDQPQGGYGTSGTRRKGAALRRAVAAEGQETVVVSPCGACKFLRRKCIAGCIFAPYFGSDQGAARFAAVHKVFGASNVSKLLSNIPESHRQEAVATVSYEAQARLADPVYGCVSSIFALQQQVASLQAEVAMTQTQLTNSRYAYATTFQTQHQQLQQPNMNLTMQPAYSNNSSASTNFMNMGNFNPGFDLAMGTAPSSHSLDPLHLSQMSHYEEEDEEESKIPQIFNQDIGPHSR 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal13g1613 236 PANTHER LOB DOMAIN CONTAINING PROTEIN 22 222 - -
Lal13g1613 236 PANTHER LOB DOMAIN-CONTAINING PROTEIN 20 22 222 - -
Lal13g1613 236 ProSiteProfiles LOB domain profile. 36 138 IPR004883 -
Lal13g1613 236 MobiDBLite consensus disorder prediction 211 236 - -
Lal13g1613 236 Pfam Lateral organ boundaries (LOB) domain 37 135 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal13g1613 Lal-Chr13 15930620 15932047 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal13g1613 1 221 AS2 family AT3G03760 55.466 9.71e-72 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lal13g1613 LOB 5.8e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal13g1613 - - aprc:113866578 301.597